RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 AKR1C2P52895 323 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 DEFA1P59665 94 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 NANOS2P60321 138 aaKnown RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 NCALDP61601 193 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 LYZP61626 148 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 AP1S1P61966 158 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SNRPD2P62316 118 aaKnown RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 GNG5P63218 68 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 HOXC5Q00444 222 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 IL15RAQ13261 267 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 WHAMMP3Q1A5X7 153 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 MESTQ5EB52 335 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TNFAIP8L3Q5GJ75 292 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 LYRM7Q5U5X0 104 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 GLYATQ6IB77 296 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TMEM205Q6UW68 189 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SBSNQ6UWP8 590 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TOMM20LQ6UXN7 152 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SHISA6Q6ZSJ9 500 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 CLEC20AQ6ZU45 233 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 KLHDC8BQ8IXV7 354 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 C1orf158Q8N1D5 194 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 Q8N377 158 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 TMEM86BQ8N661 226 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SLC25A29Q8N8R3 303 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 Q8N9W7 124 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 FER1L6-AS1Q8NA97 138 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 C20orf203Q8NBC4 194 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 LY6G5BQ8NDX9 201 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 KLHL30-AS1Q8NEE0 82 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR2M7Q8NG81 312 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR11H6Q8NGC7 330 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR9A2Q8NGT5 310 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR52N1Q8NH53 320 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR10J5Q8NHC4 309 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 GTSF1Q8WW33 167 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 C11orf40Q8WZ69 217 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 GPR146Q96CH1 333 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 PDXPQ96GD0 296 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 DERL3Q96Q80 235 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SERPINI1Q99574 410 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 CGREF1Q99674 301 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 THTPAQ9BU02 230 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 EFCAB11Q9BUY7 163 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 DEFB126Q9BYW3 111 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 FGF23Q9GZV9 251 aaPredicted RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 SH3BGRL3Q9H299 93 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR52D1Q9H346 318 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 CXorf21Q9HAI6 301 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 SDF2L1Q9HCN8 221 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 GPR84Q9NQS5 396 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 RBM12B-AS1Q9P1G2 102 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 COPZ2Q9P299 210 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 OR52A1Q9UKL2 312 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 DENND4AQ7Z401 1863 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 ADCY10Q96PN6 1610 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 THSD7BQ9C0I4 1608 aa1.51□□□□□ -2.17
RTF1-207ENST00000561076 MED1Q15648 1581 aaPredicted RBP1.51□□□□□ -2.17
RTF1-207ENST00000561076 LRRK1Q38SD2 2015 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 CACNA1FO60840 1977 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 UHRF1BP1LA0JNW5 1464 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 FANCAO15360 1455 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 PIK3C2GO75747 1445 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 ARHGEF10O15013 1369 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 KIF15Q9NS87 1388 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 TRAV9-1A0A075B6T8 112 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 A0A087WWV3 80 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 IGHV3-49A0A0A0MS15 119 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 TRAV26-2A0A0B4J265 109 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 FAM236DA0A1B0GTK5 79 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 LINC00862A6NCI5 91 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 RIIAD1A6NNX1 92 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 KRTAP16-1A8MUX0 517 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 LEUTXA8MZ59 168 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 B8ZZF3 427 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 C15orf65H3BRN8 121 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 KPNA4O00629 521 aaPredicted RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 FFAR1O14842 300 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 UBE2L6O14933 153 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 OR2J2O76002 312 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 GADD45GO95257 159 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 CCNE2O96020 404 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 DBIP07108 87 aaKnown RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 CRYGDP07320 174 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 ADRA2AP08913 450 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 SEC11BP0C7V7 166 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 SMIM17P0DL12 118 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 FAM236CP0DP71 79 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 CPMP14384 443 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 CTRLP40313 264 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 ZNF140P52738 457 aaPredicted RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 NANOS3P60323 173 aaKnown RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 CDC42P60953 191 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 EIF4EBP2Q13542 120 aaPredicted RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 SPCS2Q15005 226 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 SURF2Q15527 256 aaPredicted RBP1.5□□□□□ -2.17
RTF1-207ENST00000561076 UBE2SQ16763 222 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 PLPPR5Q32ZL2 321 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 KRTAP15-1Q3LI76 137 aa1.5□□□□□ -2.17
RTF1-207ENST00000561076 IBA57Q5T440 356 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms