RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SRSF2Q01130 221 aaKnown RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 CCBE1Q6UXH8 406 aaPredicted RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 ZNF833PQ6ZTB9 187 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 C16orf82Q7Z2V1 217 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 LAX1Q8IWV1 398 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 H1FOOQ8IZA3 346 aaPredicted RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 LYG1Q8N1E2 194 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 GVQW1Q8N7I0 195 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 OR5AP2Q8NGF4 316 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 MCFD2Q8NI22 146 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 SNAPC3Q92966 411 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 SOSTQ9BQB4 213 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 ZNF251Q9BRH9 671 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 PARP12Q9H0J9 701 aaKnown RBP7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 RAB18Q9NP72 206 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 ABCB10Q9NRK6 738 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 RDH8Q9NYR8 311 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 EXTL2Q9UBQ6 330 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 STAB1Q9NY15 2570 aa7.73□□□□□ -1.17
RABGGTA-221ENST00000561055 A6NHS1 94 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 TIMM23O14925 209 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 BET1O15155 118 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 CTDSPLO15194 276 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 ST8SIA5O15466 376 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 RGS5O15539 181 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 TUSC2O75896 110 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 TSPAN9O75954 239 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 MRPS10P82664 201 aaKnown RBP7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 FOXB2Q5VYV0 432 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 TGIF2LXQ8IUE1 241 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 DRAM1Q8N682 238 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 DTX3Q8N9I9 347 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 ABHD1Q96SE0 405 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 S1PR3Q99500 378 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 MDFIQ99750 246 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 C19orf24Q9BVV8 132 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 RANBP3Q9H6Z4 567 aaPredicted RBP7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 C1RLQ9NZP8 487 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 MRPS7Q9Y2R9 242 aaKnown RBP7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 MMP24Q9Y5R2 645 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
RABGGTA-221ENST00000561055 SAA2-SAA4A0A096LPE2 208 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 A0A1B0GUS0 222 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 RNF212BA8MTL3 300 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 OR2F2O95006 317 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 CRYBA1P05813 215 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 FAM106CPP0CH98 169 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 SAA2P0DJI9 122 aaPredicted RBP7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 TNFSF8P32971 234 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 RELBQ01201 579 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 SSBP1Q04837 148 aaKnown RBP7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 FOXL1Q12952 345 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 MSMO1Q15800 293 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 PLA1AQ53H76 456 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 PYHIN1Q6K0P9 492 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 DHRS11Q6UWP2 260 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 OVCH2Q7RTZ1 564 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 GIMAP1Q8WWP7 306 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 GCDHQ92947 438 aaPredicted RBP7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 DIRAS2Q96HU8 199 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 ABHD14BQ96IU4 210 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 RBM14Q96PK6 669 aaKnown RBP7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 GINS4Q9BRT9 223 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 C6orf62Q9GZU0 229 aaPredicted RBP7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 C16orf95Q9H693 158 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 IFT46Q9NQC8 304 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 NECAP2Q9NVZ3 263 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 MTFP1Q9UDX5 166 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 OR2W1Q9Y3N9 320 aa7.71□□□□□ -1.18
RABGGTA-221ENST00000561055 GABARAPH6UMI1 98 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 CHST1O43916 411 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 SLC22A5O76082 557 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 SNRNP70P08621 437 aaKnown RBP7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 PTBP1P26599 531 aaKnown RBP eCLIP7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 RCVRNP35243 200 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 OR3A3P47888 321 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 REG1BP48304 166 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 TAS2R46P59540 309 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 ARPC4P59998 168 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 LSAMPQ13449 338 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 DYRK1AQ13627 763 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 CDK10Q15131 360 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 LY6EQ16553 131 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 FBLN7Q53RD9 439 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 ZNF660Q6AZW8 331 aaPredicted RBP7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 DHRS7BQ6IAN0 325 aaPredicted RBP7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 MOB3BQ86TA1 216 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 SNX29P2Q8IUI4 249 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 Q8N2B8 174 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 Q8N6K4 173 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 OR56B4Q8NH76 319 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 DCUN1D5Q9BTE7 237 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 TNFRSF19Q9NS68 423 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 KLK11Q9UBX7 282 aa7.7□□□□□ -1.18
RABGGTA-221ENST00000561055 ZNF107Q9UII5 783 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms