RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 TRAT1Q6PIZ9 186 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 LAX1Q8IWV1 398 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 OR52L2PQ8NGH6 319 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 OR56B1Q8NGI3 324 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 OR52M1Q8NGK5 317 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 DPF1Q92782 380 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 SLC25A33Q9BSK2 321 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 CHMP1AQ9HD42 196 aaPredicted RBP8.53□□□□□ -1.04
TPM1-227ENST00000560970 ABRACLQ9P1F3 81 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 ELF5Q9UKW6 265 aaPredicted RBP8.53□□□□□ -1.04
TPM1-227ENST00000560970 HSF4Q9ULV5 492 aa8.53□□□□□ -1.04
TPM1-227ENST00000560970 TRBV6-6A0A0A6YYG2 114 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 A0A1W2PPI3 338 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 LEUTXA8MZ59 168 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 SPINT2O43291 252 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 UPK1BO75841 260 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 OR2F2O95006 317 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 LPLP06858 475 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 GNB3P16520 340 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 BRS3P32247 399 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 PRRX1P54821 245 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 HLA-DRB3P79483 266 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 EGFEM1PQ0D2K5 195 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 ABCA11PQ4W5N1 156 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 IDNKQ5T6J7 187 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 CENPVQ7Z7K6 275 aaPredicted RBP8.52□□□□□ -1.05
TPM1-227ENST00000560970 LINC00311Q8N616 119 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 MINDY2Q8NBR6 621 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 OR5H6Q8NGV6 325 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 SETD6Q8TBK2 473 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 TOMM40LQ969M1 308 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 SLC25A38Q96DW6 304 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 MIXL1Q9H2W2 232 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 GNG12Q9UBI6 72 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 AMMECR1Q9Y4X0 333 aaPredicted RBP8.52□□□□□ -1.05
TPM1-227ENST00000560970 V9GYH0 126 aa8.52□□□□□ -1.05
TPM1-227ENST00000560970 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 M0QZK8 103 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 PPP1CCP36873 323 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 REG1BP48304 166 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 ZNF134P52741 427 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 SCAND1P57086 179 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 CD69Q07108 199 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 TMEM30BQ3MIR4 351 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 CT45A1Q5HYN5 189 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 SLC25A48Q6ZT89 311 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 MOB1BQ7L9L4 216 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 LINC00482Q8N8I6 264 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 GDPD1Q8N9F7 314 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 OR10X1Q8NGY0 326 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 CT45A3Q8NHU0 189 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 CHPT1Q8WUD6 406 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 PTX4Q96A99 478 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 RPEQ96AT9 228 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 RAB3CQ96E17 227 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 RBMXL1Q96E39 390 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 CMTM3Q96MX0 182 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 RBM14Q96PK6 669 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 CMSS1Q9BQ75 279 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 PARP12Q9H0J9 701 aaKnown RBP8.51□□□□□ -1.05
TPM1-227ENST00000560970 ATG5Q9H1Y0 275 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 Q9N2K0 584 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 C12orf4Q9NQ89 552 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 KCNIP1Q9NZI2 227 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 COMMD3Q9UBI1 195 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 JPT1Q9UK76 154 aa8.51□□□□□ -1.05
TPM1-227ENST00000560970 IGKV1-6A0A0C4DH72 117 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 FABP12A6NFH5 140 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 HSD17B6O14756 317 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 FCGR3AP08637 254 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 SCTP09683 121 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
TPM1-227ENST00000560970 CEACAM3P40198 252 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 RANBP1P43487 201 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 HTD2P86397 168 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 ZNF816Q0VGE8 651 aaPredicted RBP8.5□□□□□ -1.05
TPM1-227ENST00000560970 MADCAM1Q13477 382 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 Q3ZCU0 254 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 MORN2Q502X0 79 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 CNIH2Q6PI25 160 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 FAM131AQ6UXB0 335 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 ETV3LQ6ZN32 361 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 ODF3L1Q8IXM7 274 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 C8orf31Q8N9H6 132 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 OR56B4Q8NH76 319 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 MAFIPQ8WZ33 124 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 ST6GALNAC6Q969X2 333 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 CREB3L1Q96BA8 519 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 DIRAS2Q96HU8 199 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 WWC2-AS2Q96NR7 200 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 B9D2Q9BPU9 175 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 RAB9BQ9NP90 201 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 OR2S2Q9NQN1 319 aa8.5□□□□□ -1.05
TPM1-227ENST00000560970 RHBDL2Q9NX52 303 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms