RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 OR11L1Q8NGX0 322 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR2AE1Q8NHA4 323 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OR1F12Q8NHA8 337 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CLDND2Q8NHS1 167 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FAM213BQ8TBF2 198 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PLPPR1Q8TBJ4 325 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 M1APQ8TC57 530 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 Q8WTZ3 238 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 DYRK2Q92630 601 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 GTF3AQ92664 365 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 TMEM45BQ96B21 275 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SGK3Q96BR1 496 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RAB39BQ96DA2 213 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RBMXL1Q96E39 390 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 GNPNAT1Q96EK6 184 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 BORCS8Q96FH0 119 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 URB1-AS1Q96HZ7 61 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF845Q96IR2 970 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 ADGRG7Q96K78 797 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 IMMP1LQ96LU5 166 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ATP5SQ99766 215 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PSMG3Q9BT73 122 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 FAAP24Q9BTP7 215 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SRXN1Q9BYN0 137 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SMIM3Q9BZL3 60 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FGF23Q9GZV9 251 aaPredicted RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 SLC25A31Q9H0C2 315 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 ZNF700Q9H0M5 742 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 WNT5BQ9H1J7 359 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 OPA3Q9H6K4 179 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 PLEKHF2Q9H8W4 249 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 Q9N2K0 584 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 KCNJ16Q9NPI9 418 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 NIT2Q9NQR4 276 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TREM2Q9NZC2 230 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 TAAR3PQ9P1P4 343 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 MIOXQ9UGB7 285 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 FBXO7Q9Y3I1 522 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 RNF115Q9Y4L5 304 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 SDK2Q58EX2 2172 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 CACNA1GO43497 2377 aa2.07□□□□□ -2.08
SPG11-223ENST00000560858 YLPM1P49750 1951 aaKnown RBP2.07□□□□□ -2.08
SPG11-223ENST00000560858 MKI67P46013 3256 aaKnown RBP2.06□□□□□ -2.08
SPG11-223ENST00000560858 ZNF407Q9C0G0 2248 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 TRBV24-1A0A075B6N3 115 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 IGKV3D-15A0A087WSY6 115 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 IGHV3-15A0A0B4J1V0 119 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1D-13A0A0B4J2D9 117 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1-6A0A0C4DH72 117 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 A0A0G2JRQ6 117 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 KIR2DS1A0A191URI9 304 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 C3orf85A0A1B0GTC6 90 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 A0A1B0GU03 582 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 LRP5LA4QPB2 252 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 FAM24AA6NFZ4 105 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 SLC22A20A6NK97 555 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 GJE1A6NN92 205 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 ZNF850A8MQ14 1090 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CDRT15L2A8MXV6 281 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 SEC14L6B5MCN3 397 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 ZNF587BE7ETH6 402 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 H3BQ15 152 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 TNFSF11O14788 317 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 DEGS1O15121 323 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HSPA12AO43301 675 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 TXNL1O43396 289 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 ADAM20O43506 726 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 SSSCA1O60232 199 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CYTIPO60759 359 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HIST1H2BKO60814 126 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 DFFBO76075 338 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 TMEM50AO95807 157 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CYB5R3P00387 301 aaPredicted RBP2.06□□□□□ -2.08
SPG11-223ENST00000560858 IFNA10P01566 189 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 PRH1P02810 166 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 ARG1P05089 322 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HIST1H2BJP06899 126 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CXCL1P09341 107 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CTXN2P0C2S0 81 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 RNF224P0DH78 156 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 IGKV1-13P0DP09 117 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 BCL2P10415 239 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 DAOP14920 347 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 B4GALT1P15291 398 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 NQO2P16083 231 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 CBR1P16152 277 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 FUT3P21217 361 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HIST1H2BOP23527 126 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 ITGA3P26006 1051 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 GNRHRP30968 328 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HIST1H2BBP33778 126 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 KIR2DS4P43632 304 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 GLIPR1P48060 266 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 DYNLT3P51808 116 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 PAX9P55771 341 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 MLF1P58340 268 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 HIST1H2BDP58876 126 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 TAS2R30P59541 319 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 RAB2AP61019 212 aa2.06□□□□□ -2.08
SPG11-223ENST00000560858 PCBD1P61457 104 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms