RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 TGIF2LXQ8IUE1 241 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 BEST4Q8NFU0 473 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 EDARADDQ8WWZ3 215 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 SNAPC3Q92966 411 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 GINS4Q9BRT9 223 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 AGMATQ9BSE5 352 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 C6orf62Q9GZU0 229 aaPredicted RBP12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 RNF150Q9ULK6 438 aa12.44□□□□□ -0.42
LYSMD2-204ENST00000560491 TMEM89A2RUT3 159 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 ZNF701M0R085 212 aaPredicted RBP12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 ITGB1BP1O14713 200 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 DIRAS3O95661 229 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 SNRNP70P08621 437 aaKnown RBP12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 PRSS3P35030 304 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 RPL39P5Q59GN2 51 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 RNASE12Q5GAN4 147 aaKnown RBP12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 ZNF833PQ6ZTB9 187 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 MCFD2Q8NI22 146 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 MRPL20Q9BYC9 149 aaKnown RBP12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 TOLLIPQ9H0E2 274 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 IFT46Q9NQC8 304 aa12.43□□□□□ -0.42
LYSMD2-204ENST00000560491 FAM90A9PA6NNJ1 464 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 LANCL1O43813 399 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 OR8U9P0C7N5 309 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 CBX5P45973 191 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 RAG2P55895 527 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 ARPC4P59998 168 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 RPL15P61313 204 aaKnown RBP12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 HABP2Q14520 560 aaPredicted RBP12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 FOXB2Q5VYV0 432 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 LIAT1Q6ZQX7 453 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 Q6ZSV7 163 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 OR8U1Q8NH10 309 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 GPX8Q8TED1 209 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 NXF2Q9GZY0 626 aaKnown RBP12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 PIPOXQ9P0Z9 390 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 ADAM30Q9UKF2 790 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 ANAPC10Q9UM13 185 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 COL6A5A8TX70 2615 aa12.42□□□□□ -0.42
LYSMD2-204ENST00000560491 J3QRK9 145 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 RAB29O14966 203 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 TXNL1O43396 289 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 LPLP06858 475 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 CTXN2P0C2S0 81 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 MDKP21741 143 aaPredicted RBP12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 NFYAP23511 347 aaPredicted RBP12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 LSAMPQ13449 338 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 HES1Q14469 280 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 HNF4GQ14541 408 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 ABHD1Q96SE0 405 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 NABP2Q9BQ15 211 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 SLC25A33Q9BSK2 321 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 OR2D2Q9H210 308 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 RAB18Q9NP72 206 aa12.41□□□□□ -0.42
LYSMD2-204ENST00000560491 NDUFA7O95182 113 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 FAM106CPP0CH98 169 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 TMEM11P17152 192 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 GPR12P47775 334 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 AWAT1Q58HT5 328 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 C5orf30Q96GV9 206 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 DIRAS2Q96HU8 199 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 S1PR3Q99500 378 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 SCPEP1Q9HB40 452 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 ZNF221Q9UK13 617 aa12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 RBM7Q9Y580 266 aaKnown RBP12.4□□□□□ -0.42
LYSMD2-204ENST00000560491 PROP1O75360 226 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 OR2F2O95006 317 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 LINC00205P59089 165 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 FAM71F2Q6NXP2 309 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 GLDNQ6ZMI3 551 aaPredicted RBP12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 OR5AP2Q8NGF4 316 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 EAF1Q96JC9 268 aaPredicted RBP12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 RBM14Q96PK6 669 aaKnown RBP12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 NPFFR1Q9GZQ6 430 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 NECAP2Q9NVZ3 263 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 SIGLEC9Q9Y336 463 aa12.39□□□□□ -0.43
LYSMD2-204ENST00000560491 IGKV1D-13A0A0B4J2D9 117 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 PMP2P02689 132 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 CT45A6P0DMU7 189 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 CT45A5P0DMU8 189 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 CT45A7P0DMV0 189 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 IGKV1-13P0DP09 117 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 NAT1P18440 290 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 HLA-DMAP28067 261 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 CD1BP29016 333 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 FCGR2CP31995 323 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 TNFSF8P32971 234 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 COMPP49747 757 aaPredicted RBP12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 BLCAPP62952 87 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 FOXL1Q12952 345 aa12.38□□□□□ -0.43
LYSMD2-204ENST00000560491 CDK10Q15131 360 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms