RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HMGN3Q15651 99 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 PNLIPRP3Q17RR3 467 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 LRRC75BQ2VPJ9 315 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 OR4D10Q8NGI6 311 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 CCDC107Q8WV48 283 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 GHITMQ9H3K2 345 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 TAF9BQ9HBM6 251 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
PKNOX1-209ENST00000560448 J3QR06 171 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 NDUFB6O95139 128 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 HBZP02008 142 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 CD3DP04234 171 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF735P0CB33 412 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 RCC1P18754 421 aaPredicted RBP11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 RCVRNP35243 200 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 KIR2DS4P43632 304 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 LOXL3P58215 753 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 KIR2DS1Q14954 304 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 STEAP1BQ6NZ63 245 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 C20orf85Q9H1P6 137 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 ZNF286AQ9HBT8 521 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 PITPNC1Q9UKF7 332 aa11.34□□□□□ -0.59
PKNOX1-209ENST00000560448 MDFIC2A0A1B0GVS7 189 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 A0A1W2PRD5 423 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 A0A1W2PRF3 423 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 A0A1W2PRM7 423 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 NAT1P18440 290 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 IL3RAP26951 378 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 BRS3P32247 399 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 RRAS2P62070 204 aaPredicted RBP11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 NUDCD2Q8WVJ2 157 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 AJUBAQ96IF1 538 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 CYYR1Q96J86 154 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 MCUBQ9NWR8 336 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 FLVCR2Q9UPI3 526 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 PSG11Q9UQ72 335 aa11.33□□□□□ -0.6
PKNOX1-209ENST00000560448 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 TXNL1O43396 289 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 YPEL1O60688 119 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 PEX14O75381 377 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 DTYMKP23919 212 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 EIF2B2P49770 351 aaKnown RBP11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 RAB7AP51149 207 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 Q6ZS49 121 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 YPEL2Q96QA6 119 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 SSX3Q99909 188 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 Q9N2K0 584 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 OR2S2Q9NQN1 319 aa11.32□□□□□ -0.6
PKNOX1-209ENST00000560448 TRAV39A0A0B4J263 110 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ZNF736B4DX44 427 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ARPC1BO15143 372 aaKnown RBP11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 PRAF2O60831 178 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 RAB3DO95716 219 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 CRYBA1P05813 215 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 FCER2P06734 321 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ZNF137PP52743 207 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 HLA-DRB3P79483 266 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ARFRP1Q13795 201 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 SSX2Q16385 188 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 KRTAP24-1Q3LI83 254 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 OR8H3Q8N146 312 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 PRR18Q8N4B5 295 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 GVQW1Q8N7I0 195 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 OR51S1Q8NGJ8 323 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 RPEQ96AT9 228 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 TINAGL1Q9GZM7 467 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 OR51J1Q9H342 316 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 ZNF221Q9UK13 617 aa11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 SOX21Q9Y651 276 aaPredicted RBP11.31□□□□□ -0.6
PKNOX1-209ENST00000560448 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 TRDCB7Z8K6 153 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 LY6LH3BQJ8 138 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 M0QYG6 137 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 IGHV4-59P01825 116 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 IL5P05113 134 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 ZBTB25P24278 435 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 GNG2P59768 71 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 RBMS2Q15434 407 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 MORN2Q502X0 79 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 SLC25A48Q6ZT89 311 aaKnown RBP11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 OR4A4PQ8NGN8 299 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 GIMAP1Q8WWP7 306 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
PKNOX1-209ENST00000560448 C19orf24Q9BVV8 132 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms