RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TEX50A0A1B0GTY4 177 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 CDS2O95674 445 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 MBPP02686 304 aaPredicted RBP11.65□□□□□ -0.54
TRAF3-208ENST00000560371 SMIM10L1P0DMW3 83 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 RPL27AP46776 148 aaKnown RBP11.65□□□□□ -0.54
TRAF3-208ENST00000560371 B2MP61769 119 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 ZNF273Q14593 569 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 C16orf82Q7Z2V1 217 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 SMIM10Q96HG1 83 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 SNX22Q96L94 193 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 GHITMQ9H3K2 345 aa11.65□□□□□ -0.54
TRAF3-208ENST00000560371 LEUTXA8MZ59 168 aa11.65□□□□□ -0.55
TRAF3-208ENST00000560371 GCGP01275 180 aa11.65□□□□□ -0.55
TRAF3-208ENST00000560371 C8orf82Q6P1X6 216 aaPredicted RBP11.65□□□□□ -0.55
TRAF3-208ENST00000560371 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.55
TRAF3-208ENST00000560371 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.55
TRAF3-208ENST00000560371 CALHM1Q8IU99 346 aa11.65□□□□□ -0.55
TRAF3-208ENST00000560371 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.55
TRAF3-208ENST00000560371 HMSDA8MTL9 139 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 GCSHP23434 173 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 SLC25A53Q5H9E4 307 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 TNCP24821 2201 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 A0A1W2PNV4 684 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 ZNHIT1O43257 154 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 MGPP08493 103 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 RPEL1Q2QD12 228 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 PHYHIPLQ96FC7 376 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 KLHDC2Q9Y2U9 406 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 CRHP06850 196 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 NANOS3P60323 173 aaKnown RBP11.64□□□□□ -0.55
TRAF3-208ENST00000560371 ZNF154Q13106 437 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 SLC25A47Q6Q0C1 308 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 FADS6Q8N9I5 356 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 NKX2-6A6NCS4 301 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 PPP1R32Q7Z5V6 425 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 BVESQ8NE79 360 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 KCNK17Q96T54 332 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 ADAM11O75078 769 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 CLDN34H7C241 214 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 HPRT1P00492 218 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 GUCA2BQ16661 112 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
TRAF3-208ENST00000560371 SONP18583 2426 aaKnown RBP11.64□□□□□ -0.55
TRAF3-208ENST00000560371 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 OR2H2O95918 312 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 P01737 135 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 IZUMO4Q1ZYL8 232 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 ANKRD55Q3KP44 614 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 LOC105371242A0A075B767 164 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 IFI6P09912 130 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 SULT1A2P50226 295 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 GCSAMQ8N6F7 178 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 PTX4Q96A99 478 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 ABHD17AQ96GS6 310 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 METTL26Q96S19 204 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 CHRNA10Q9GZZ6 450 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 Q6ZT83 130 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 B9A039 149 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 CYB5R3P00387 301 aaPredicted RBP11.63□□□□□ -0.55
TRAF3-208ENST00000560371 TMEM50BP56557 158 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 SNAI3Q3KNW1 292 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 FAM209AQ5JX71 171 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 ELOVL5Q9NYP7 299 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 FOXH1O75593 365 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 ADAD2Q8NCV1 583 aaKnown RBP11.63□□□□□ -0.55
TRAF3-208ENST00000560371 OR1L6Q8NGR2 347 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 TIMP4Q99727 224 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 METTL1Q9UBP6 276 aaKnown RBP11.63□□□□□ -0.55
TRAF3-208ENST00000560371 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
TRAF3-208ENST00000560371 RBFOX3A6NFN3 312 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 GDF9O60383 454 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 SS18L1O75177 396 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-208ENST00000560371 ROM1Q03395 351 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 DYSFO75923 2080 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 ODAMA1E959 279 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 MFNGO00587 321 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 FAM157CP0CG43 387 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 AKIRIN1Q9H9L7 192 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-208ENST00000560371 A0A1W2PS18 150 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 LIMS1P48059 325 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 GZMMP51124 257 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 HOGA1Q86XE5 327 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 ARL6IP6Q8N6S5 226 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 EAF1Q96JC9 268 aaPredicted RBP11.62□□□□□ -0.55
TRAF3-208ENST00000560371 C16orf92Q96LL3 132 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 IGHV1-69-2A0A0G2JMI3 117 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 FCGR3AP08637 254 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 AANATQ16613 207 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 TM4SF20Q53R12 229 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 RRN3P1Q2M238 152 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 TIMM23BQ5SRD1 257 aa11.62□□□□□ -0.55
TRAF3-208ENST00000560371 SNRNP40Q96DI7 357 aaKnown RBP11.62□□□□□ -0.55
TRAF3-208ENST00000560371 DHRS7CA6NNS2 312 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms