RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 MSI2Q96DH6 328 aaKnown RBP4.25□□□□□ -1.73
SPG11-220ENST00000559933 ABHD14BQ96IU4 210 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 TBX15Q96SF7 602 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 FOXC2Q99958 501 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 GINS4Q9BRT9 223 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 MEGF9Q9H1U4 602 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 HIF1ANQ9NWT6 349 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 RDH8Q9NYR8 311 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 KCNIP1Q9NZI2 227 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 OR6C3Q9NZP0 311 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 RNF150Q9ULK6 438 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 KCNS2Q9ULS6 477 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 PSG11Q9UQ72 335 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 VSIG4Q9Y279 399 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 CREBBPQ92793 2442 aa4.25□□□□□ -1.73
SPG11-220ENST00000559933 hCG_2014768A0A024R1R8 64 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 TRAV6A0A075B6T7 132 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 TRBV6-7A0A0A0MS04 114 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 IGHV2-26A0A0B4J1V2 119 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 TRAV40A0A0B4J280 105 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 KIR2DS1A0A191URI9 304 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 ZNF729A6NN14 1252 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 C17orf98A8MV24 154 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 VGLL3A8MV65 326 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 NPIPB11E5RHQ5 1161 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 RNASEK-C17orf49H0YIS7 233 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 F2RL2O00254 374 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 ARPC1BO15143 372 aaKnown RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 SPINT2O43291 252 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 HSPA12AO43301 675 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 ENSAO43768 121 aaKnown RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 TUSC2O75896 110 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 TPPPO94811 219 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 PPYP01298 95 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 LIPFP07098 398 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 MSMBP08118 114 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR8U9P0C7N5 309 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 IGHV1-8P0DP01 117 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 VSIG10L2P0DP72 767 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 MMP9P14780 707 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 PGAM2P15259 253 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 CEACAM6P40199 344 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 KIR2DS4P43632 304 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR3A3P47888 321 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 REG1BP48304 166 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 DVL1P1P54792 670 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 TAS2R46P59540 309 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 UBE2MP61081 183 aaKnown RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 TSPAN5P62079 268 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 MEF2CQ06413 473 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 LOXL1Q08397 574 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 DYRK1AQ13627 763 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 KIR2DS1Q14954 304 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 Q3ZCU0 254 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 PHLDA2Q53GA4 152 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 PLA1AQ53H76 456 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 RPL39P5Q59GN2 51 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 CT45A1Q5HYN5 189 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 VAX1Q5SQQ9 334 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 IDO2Q6ZQW0 420 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 Q6ZS49 121 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 Q71RC1 249 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 LHFPL4Q7Z7J7 247 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 ADAD2Q8NCV1 583 aaKnown RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR8U1Q8NH10 309 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR10J5Q8NHC4 309 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 CT45A3Q8NHU0 189 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 MARCH1Q8TCQ1 289 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 C15orf40Q8WUR7 153 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 SECTM1Q8WVN6 248 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 CORO2AQ92828 525 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 LHX4Q969G2 390 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 TMEM230Q96A57 120 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 GALMQ96C23 342 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 SEC22CQ9BRL7 303 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 SIRPDQ9H106 197 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR2D2Q9H210 308 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 IFI27L2Q9H2X8 130 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 GAL3ST2Q9H3Q3 398 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 RIMS4Q9H426 269 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 OR2S2Q9NQN1 319 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 CCL28Q9NRJ3 127 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 NECAP2Q9NVZ3 263 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 GNG12Q9UBI6 72 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 EDARQ9UNE0 448 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 UBE2J1Q9Y385 318 aaPredicted RBP4.24□□□□□ -1.73
SPG11-220ENST00000559933 INSIG2Q9Y5U4 225 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 DOCK11Q5JSL3 2073 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 ACANP16112 2415 aa4.24□□□□□ -1.73
SPG11-220ENST00000559933 WNK2Q9Y3S1 2297 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 NAV3Q8IVL0 2385 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 A0A0B4J293 547 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 MDFIC2A0A1B0GVS7 189 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 FUOMA2VDF0 154 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 A8MV72 311 aaPredicted RBP4.23□□□□□ -1.73
SPG11-220ENST00000559933 DISC1C4P0D8 188 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 H3BUI4 141 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 FOXH1O75593 365 aa4.23□□□□□ -1.73
SPG11-220ENST00000559933 TOX4O94842 621 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms