RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 BARX1Q9HBU1 254 aaPredicted RBP14.19□□□□□ -0.14
CHRNA3-206ENST00000559658 LPAR2Q9HBW0 351 aa14.19□□□□□ -0.14
CHRNA3-206ENST00000559658 LPAR3Q9UBY5 353 aa14.19□□□□□ -0.14
CHRNA3-206ENST00000559658 PGLYRP1O75594 196 aaPredicted RBP14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 CD34P28906 385 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 RPL39P5Q59GN2 51 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 CD276Q5ZPR3 534 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 AKAP14Q86UN6 197 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 ODF3L1Q8IXM7 274 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 C12orf45Q8N5I9 185 aaPredicted RBP14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 LHFPL5Q8TAF8 219 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 MITD1Q8WV92 249 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 ABHD14AQ9BUJ0 271 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 MMP26Q9NRE1 261 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 SDHAF2Q9NX18 166 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 ONECUT1Q9UBC0 465 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 WNK2Q9Y3S1 2297 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 LOC105371242A0A075B767 164 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 C17orf98A8MV24 154 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 SMLR1H3BR10 107 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 MPPED1O15442 326 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 CCNKO75909 580 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 IGHV1-8P0DP01 117 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 Q3ZCU0 254 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 KCTD9Q7L273 389 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 ZNF645Q8N7E2 425 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 Q8N7P7 452 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 ZNF486Q96H40 463 aaPredicted RBP14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 MGAT4CQ9UBM8 478 aa14.18□□□□□ -0.14
CHRNA3-206ENST00000559658 GOSR2O14653 212 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 DUS4LO95620 317 aaKnown RBP14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 H2BFSP57053 126 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 RPL30P62888 115 aaKnown RBP14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 LY6G6FQ5SQ64 297 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 SGPP2Q8IWX5 399 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 DRAXINQ8NBI3 349 aaPredicted RBP14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 DMRTB1Q96MA1 342 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 ZANQ9Y493 2812 aa14.17□□□□□ -0.14
CHRNA3-206ENST00000559658 SAA2-SAA4A0A096LPE2 208 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 MPTX1A8MV57 137 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 GPR37O15354 613 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 ADAP1O75689 374 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 IFNA2P01563 188 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 SAA2P0DJI9 122 aaPredicted RBP14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 RND3P61587 244 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 ARF6P62330 175 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 PAX2Q02962 417 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 TMEM187Q14656 261 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 CLEC12BQ2HXU8 276 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 DEFB113Q30KQ7 82 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 OR2B11Q5JQS5 317 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 LPCAT3Q6P1A2 487 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 GLYATL2Q8WU03 294 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 C3orf85A0A1B0GTC6 90 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 TRAPPC2P0DI81 140 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 TRAPPC2BP0DI82 140 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 FAM219AQ8IW50 185 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 CCDC71LQ8N9Z2 235 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 OR52M1Q8NGK5 317 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 EDARADDQ8WWZ3 215 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 CHIAQ9BZP6 476 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 SIRT7Q9NRC8 400 aa14.16□□□□□ -0.14
CHRNA3-206ENST00000559658 DBX1A6NMT0 343 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 LINC00473A8K010 186 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 NDUFS8O00217 210 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 LIPFP07098 398 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 BRWD1-AS2P59051 145 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 SLC25A48Q6ZT89 311 aaKnown RBP14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 CMTM1Q8IZ96 169 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 LYG1Q8N1E2 194 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 MSI2Q96DH6 328 aaKnown RBP14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 GALNT14Q96FL9 552 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 PHB2Q99623 299 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 ZNF251Q9BRH9 671 aa14.15□□□□□ -0.14
CHRNA3-206ENST00000559658 A8MXK9 166 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 RGS11O94810 467 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF16P17020 682 aaPredicted RBP14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 COX7A1P24310 79 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 GPR12P47775 334 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 KLRD1Q13241 179 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 DIAPH2-AS1Q14236 149 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 KRTAP1-3Q8IUG1 177 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 PIPOXQ9P0Z9 390 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 SESN1Q9Y6P5 492 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 A0A096LNT2 108 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 SLC22A5O76082 557 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 F2RP25116 425 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 MAPK1IP1LQ8NDC0 245 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 OR10A7Q8NGE5 316 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 TMEM133Q9H2Q1 129 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 RAB9BQ9NP90 201 aa14.14□□□□□ -0.15
CHRNA3-206ENST00000559658 ZNF469Q96JG9 3925 aaPredicted RBP14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 CCDC168Q8NDH2 2452 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 RAMP3O60896 148 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 DNASE1P24855 282 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 Q5BKY6 102 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 PDZD9Q8IXQ8 264 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 AKR1E2Q96JD6 320 aa14.13□□□□□ -0.15
CHRNA3-206ENST00000559658 BEX4Q9NWD9 120 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms