RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 NUP37Q8NFH4 326 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 RHBDD1Q8TEB9 315 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 TMEM147Q9BVK8 224 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 SMDT1Q9H4I9 107 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 PEF1Q9UBV8 284 aaKnown RBP6.15□□□□□ -1.42
USP3-210ENST00000559192 TUBD1Q9UJT1 453 aa6.15□□□□□ -1.42
USP3-210ENST00000559192 IGKV1D-8A0A087WSZ0 117 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 IFI6P09912 130 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 FAM157CP0CG43 387 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 CD40P25942 277 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 RFESDQ8TAC1 157 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 C10orf35Q96D05 121 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 RBKSQ9H477 322 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 GNB4Q9HAV0 340 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 B3GAT1Q9P2W7 334 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 FZR1Q9UM11 496 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 POLDIP2Q9Y2S7 368 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 A0A0U1RQV5 110 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 A6NJY4 79 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 H7C2G1 150 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 SRP19P09132 144 aaKnown RBP6.15□□□□□ -1.43
USP3-210ENST00000559192 HLA-GP17693 338 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 EPHA8P29322 1005 aaPredicted RBP6.15□□□□□ -1.43
USP3-210ENST00000559192 MPLP40238 635 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 RIPPLY3P57055 190 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 RTP5Q14D33 572 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 PMCHL1Q16048 86 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 ZNF506Q5JVG8 444 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 SLC25A34Q6PIV7 304 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 TRAT1Q6PIZ9 186 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 D2HGDHQ8N465 521 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 ST6GALNAC3Q8NDV1 305 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 DUSP13Q9UII6 198 aa6.15□□□□□ -1.43
USP3-210ENST00000559192 TP53BP1Q12888 1972 aaPredicted RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 LOC390937A0A1W2PQ73 354 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 S100A4P26447 101 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 SUPT4H1P63272 117 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 PLAURQ03405 335 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 OR2Y1Q8NGV0 311 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 CISD1Q9NZ45 108 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 LRRC3CA6NJW4 275 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 C9JQL5 133 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 M0R3E3 92 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 NGFP01138 241 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 APCSP02743 223 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 SNRPCP09234 159 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 CXCL1P09341 107 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 AREGP15514 252 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 BMI1P35226 326 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 PMELP40967 661 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 FNDC7Q5VTL7 733 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 OR1L4Q8NGR5 311 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 GALNT14Q96FL9 552 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 TAAR3PQ9P1P4 343 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 PSG11Q9UQ72 335 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 OR2W1Q9Y3N9 320 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 A0A1B0GU03 582 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 GALR2O43603 387 aaPredicted RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 FCGR3BO75015 233 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 IGKV3-11P04433 115 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 P2RY6Q15077 328 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 CISD2Q8N5K1 135 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 VOPP1Q96AW1 172 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 GPR146Q96CH1 333 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 S1PR3Q99500 378 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 GAL3ST2Q9H3Q3 398 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 TMEM38BQ9NVV0 291 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 PLXNA4Q9HCM2 1894 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 SLC25A5P05141 298 aaKnown RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 GNG3P63215 75 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 RELQ04864 619 aaPredicted RBP6.14□□□□□ -1.43
USP3-210ENST00000559192 MST1LQ2TV78 715 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 DNLZQ5SXM8 178 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 RHBDD2Q6NTF9 364 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 MUC15Q8N387 334 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 MRGPRDQ8TDS7 321 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 ABHD3Q8WU67 409 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 PKIBQ9C010 78 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 OCIAD1Q9NX40 245 aa6.14□□□□□ -1.43
USP3-210ENST00000559192 PGLYRP1O75594 196 aaPredicted RBP6.13□□□□□ -1.43
USP3-210ENST00000559192 ADIPOQQ15848 244 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 ADTRPQ96IZ2 230 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 ZNF391Q9UJN7 358 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 EP400Q96L91 3159 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 OR2T8A6NH00 312 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 C5orf67F2Z3F1 127 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BKO60814 126 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BJP06899 126 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 COX6CP09669 75 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BOP23527 126 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BBP33778 126 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BDP58876 126 aa6.13□□□□□ -1.43
USP3-210ENST00000559192 HIST1H2BCP62807 126 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms