RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 RCL1Q9Y2P8 373 aaKnown RBP6.43□□□□□ -1.38
LRRC28-211ENST00000558890 CHD3Q12873 2000 aaKnown RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 H0Y980 276 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 NDUFS8O00217 210 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 WRBO00258 174 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 HSD17B6O14756 317 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 MLNRO43193 412 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TUSC2O75896 110 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 NXPH2O95156 264 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 IGHV1-46P01743 117 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SCTP09683 121 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 GNRHRP30968 328 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 NKX2-1P43699 371 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SULT1A2P50226 295 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 EFNA4P52798 201 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 DSCR9P59020 149 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 DEFB113Q30KQ7 82 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 VHLLQ6RSH7 139 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 PRSS57Q6UWY2 283 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 Q6ZPA2 131 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 Q6ZR03 302 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 FAM219AQ8IW50 185 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 C1orf87Q8N0U7 546 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 GAPTQ8N292 157 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SVBPQ8N300 66 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 OR5D13Q8NGL4 314 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 OR10J5Q8NHC4 309 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 RNASE11Q8TAA1 199 aaKnown RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 GLYATL2Q8WU03 294 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 RDH5Q92781 318 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF488Q96MN9 340 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM56Q96MV1 263 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TP53RKQ96S44 253 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TSNAXQ99598 290 aaKnown RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 CCL19Q99731 98 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 CABLES2Q9BTV7 478 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SMIM3Q9BZL3 60 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SLC25A31Q9H0C2 315 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TREM1Q9NP99 234 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 PARP11Q9NR21 331 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 FAM212BQ9NTI7 297 aaPredicted RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM56-RWDD3S4R434 201 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 SONP18583 2426 aaKnown RBP6.42□□□□□ -1.38
LRRC28-211ENST00000558890 ABCA1O95477 2261 aa6.42□□□□□ -1.38
LRRC28-211ENST00000558890 TRAV24A0A0B4J272 114 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM218A2RU14 115 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 LRRC30A6NM36 301 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 NPIPB11E5RHQ5 1161 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 SIRPB1O00241 398 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 SH2D1BO14796 132 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TSPAN4O14817 238 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 LILRA1O75019 489 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 MMP9P14780 707 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 RCC1P18754 421 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-211ENST00000558890 UCP1P25874 307 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 KCNJ3P48549 501 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 F2RL1P55085 397 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM33P57088 247 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TNFAIP6P98066 277 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF154Q13106 437 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 BTN1A1Q13410 526 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF266Q14584 549 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 ZNF880Q6PDB4 577 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 LRP11Q86VZ4 500 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 LDLRAD3Q86YD5 345 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 H1FOOQ8IZA3 346 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-211ENST00000558890 SPAG16Q8N0X2 631 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 UBAC2Q8NBM4 344 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 OR4D5Q8NGN0 318 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 SMIM8Q96KF7 97 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 MEGF10Q96KG7 1140 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 NRIP2Q9BQI9 281 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 HRH4Q9H3N8 390 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 UBTD1Q9HAC8 227 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 SAP30LQ9HAJ7 183 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TREM2Q9NZC2 230 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 TRAPPC2LQ9UL33 140 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 LAMP3Q9UQV4 416 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 OR2W1Q9Y3N9 320 aa6.41□□□□□ -1.38
LRRC28-211ENST00000558890 NSD1Q96L73 2696 aaPredicted RBP6.41□□□□□ -1.38
LRRC28-211ENST00000558890 IGHV1-69-2A0A0G2JMI3 117 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 TMEM30CPA0ZSE6 113 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 RNF212BA8MTL3 300 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 SRRM5B3KS81 715 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 F8W036 122 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 HSPA12AO43301 675 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 ADAM20O43506 726 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 NDUFA2O43678 99 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 NDUFS7O75251 213 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 PITX3O75364 302 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 FBXO24O75426 580 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 RHBDL1O75783 438 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 ATG12O94817 140 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 OR2H2O95918 312 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 SERPINE2P07093 398 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 SEC11BP0C7V7 166 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 FAM157CP0CG43 387 aa6.4□□□□□ -1.38
LRRC28-211ENST00000558890 PGA5P0DJD9 388 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms