RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NACADO15069 1562 aa2.15□□□□□ -2.06
CASC4-206ENST00000558847 NUP205Q92621 2012 aa2.15□□□□□ -2.06
CASC4-206ENST00000558847 TINCRA0A1B0GVN0 87 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 A0A1W2PNM2 257 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 IGSF23A1L1A6 192 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 GRIFINA4D1Z8 144 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 PFDN6O15212 129 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 CRTAPO75718 401 aaPredicted RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 C8orf88P0DMB2 117 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 ZNF22P17026 224 aaPredicted RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 CDC34P49427 236 aaPredicted RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 TAS2R45P59539 299 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 SNAP25P60880 206 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 FGF12P61328 243 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 BTN3A2P78410 334 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 MEF2BQ02080 365 aaPredicted RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 MRPL51Q4U2R6 128 aaKnown RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 CCDC121Q6ZUS5 278 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 CCDC112Q8NEF3 446 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 MNS1Q8NEH6 495 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 OR2D3Q8NGH3 330 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 MS4A6EQ96DS6 147 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 TBX5Q99593 518 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 GNB1LQ9BYB4 327 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 NKX6-2Q9C056 277 aaPredicted RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 MS4A6AQ9H2W1 248 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 HES4Q9HCC6 221 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 FGFR1OP2Q9NVK5 253 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 HHLA2Q9UM44 414 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 MRPS16Q9Y3D3 137 aaKnown RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 DNMT1P26358 1616 aaKnown RBP2.15□□□□□ -2.07
CASC4-206ENST00000558847 SDK2Q58EX2 2172 aa2.15□□□□□ -2.07
CASC4-206ENST00000558847 MYO5BQ9ULV0 1848 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 TRIOBPQ9H2D6 2365 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 C5orf49A4QMS7 147 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 F5H768 121 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 COCHO43405 550 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 ATP5G1P05496 136 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 CA7P43166 264 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 LPAR6P43657 344 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 HPCAP84074 193 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 FABP5Q01469 135 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 TNFRSF9Q07011 255 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 N4BP2L1Q5TBK1 243 aaPredicted RBP2.14□□□□□ -2.07
CASC4-206ENST00000558847 ZNF322Q6U7Q0 402 aaPredicted RBP2.14□□□□□ -2.07
CASC4-206ENST00000558847 SDIM1Q6ZPB5 146 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 SCXQ7RTU7 201 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 RIBC1Q8N443 379 aaPredicted RBP2.14□□□□□ -2.07
CASC4-206ENST00000558847 OR2V1Q8NHB1 315 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 JOSD2Q8TAC2 188 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 SUN5Q8TC36 379 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 SLC37A2Q8TED4 501 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 MGLLQ99685 303 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 NSRP1Q9H0G5 558 aaKnown RBP2.14□□□□□ -2.07
CASC4-206ENST00000558847 TAS2R9Q9NYW1 312 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 PTPRJQ12913 1337 aa2.14□□□□□ -2.07
CASC4-206ENST00000558847 ABCC11Q96J66 1382 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 LOC102725191A0A1B0GVB3 256 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 CRYGDP07320 174 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 ZNF117Q03924 483 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 TMEM267Q0VDI3 215 aaPredicted RBP2.13□□□□□ -2.07
CASC4-206ENST00000558847 MESTQ5EB52 335 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 CST9Q5W186 159 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 ATP5L2Q7Z4Y8 100 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 OR10D4PQ8NGN7 298 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 OR10A6Q8NH74 314 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 PIGXQ8TBF5 258 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 Q8WTZ3 238 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 CPNE2Q96FN4 548 aaPredicted RBP2.13□□□□□ -2.07
CASC4-206ENST00000558847 MBOAT7Q96N66 472 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 PARVGQ9HBI0 331 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 TXNL4BQ9NX01 149 aaKnown RBP2.13□□□□□ -2.07
CASC4-206ENST00000558847 HDGFL3Q9Y3E1 203 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 HEY1Q9Y5J3 304 aa2.13□□□□□ -2.07
CASC4-206ENST00000558847 LRRN3E7EW58 273 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 GSTZ1O43708 216 aaPredicted RBP2.12□□□□□ -2.07
CASC4-206ENST00000558847 ZNF73O43830 326 aaPredicted RBP2.12□□□□□ -2.07
CASC4-206ENST00000558847 MT-CO2P00403 227 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 IL6P05231 212 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 SLC25A16P16260 332 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 COILP38432 576 aaPredicted RBP2.12□□□□□ -2.07
CASC4-206ENST00000558847 HERVK_113P63121 156 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 HOXC5Q00444 222 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 DEFA6Q01524 100 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 HTR4Q13639 388 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 SLC51BQ86UW2 128 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 FNDC9Q8TBE3 224 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 LMX1AQ8TE12 382 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 TMA16Q96EY4 203 aaKnown RBP2.12□□□□□ -2.07
CASC4-206ENST00000558847 EMC3Q9P0I2 261 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 OR51B4Q9Y5P0 310 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 HSPE1-MOB4S4R3N1 261 aa2.12□□□□□ -2.07
CASC4-206ENST00000558847 MAP3K5Q99683 1374 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 LTBP4Q8N2S1 1624 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 CACNA1DQ01668 2161 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 IGHV3-73A0A0B4J1V6 119 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 C17orf98A8MV24 154 aa2.11□□□□□ -2.07
CASC4-206ENST00000558847 M0QZ92 97 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms