RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 C3orf56Q8N813 242 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 ZSCAN4Q8NAM6 433 aaPredicted RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 CCDC54Q8NEL0 328 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 PXT1Q8NFP0 134 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 OR4P4Q8NGL7 312 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 OR1L1Q8NH94 360 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 MRGPRDQ8TDS7 321 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 CORO2AQ92828 525 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 SPSB1Q96BD6 273 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 GRAMD2BQ96HH9 432 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 TMEM68Q96MH6 324 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 SULT4A1Q9BR01 284 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 HDHD3Q9BSH5 251 aaPredicted RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 FAAP24Q9BTP7 215 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 ANKRD60Q9BZ19 345 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 SELENOIQ9C0D9 397 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 SLITRK2Q9H156 845 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 SEBOXQ9HB31 216 aaPredicted RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 RANGRFQ9HD47 186 aaPredicted RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 EXOSC4Q9NPD3 245 aaKnown RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 TMEM138Q9NPI0 162 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 CHCHD3Q9NX63 227 aaKnown RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 ZNF580Q9UK33 172 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 ERGIC3Q9Y282 383 aa3.37□□□□□ -1.87
SPG11-211ENST00000558561 MRPS28Q9Y2Q9 187 aaKnown RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 RRP15Q9Y3B9 282 aaKnown RBP3.37□□□□□ -1.87
SPG11-211ENST00000558561 IGKV1D-8A0A087WSZ0 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 MEIKINA0A087WXM9 373 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 IGHV2-26A0A0B4J1V2 119 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 IGHV3-72A0A0B4J1Y9 119 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 hADV38S2A0JD32 116 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 A6NDX4 124 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 CLDN34H7C241 214 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 MYL12BO14950 172 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 DENRO43583 198 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE7O76087 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR7C1O76099 320 aaPredicted RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 IGLV1-47P01700 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 CD3GP09693 182 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 UCHL1P09936 223 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE12FP0CL80 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE12GP0CL81 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE12IP0CL82 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 EEF1B2P24534 225 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 ERP29P30040 261 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 REG1BP48304 166 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GNG10P50151 68 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 RAG2P55895 527 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 RBM11P57052 281 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 ACSM1Q08AH1 577 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE1Q13065 139 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GAGE4Q13068 117 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 GNMTQ14749 295 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 CTF1Q16619 201 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 IZUMO4Q1ZYL8 232 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 C2orf76Q3KRA6 126 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 MOGAT2Q3SYC2 334 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 PAN3Q58A45 887 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 YIF1BQ5BJH7 314 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 C1orf100Q5SVJ3 147 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 HES5Q5TA89 166 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 C6orf201Q7Z4U5 140 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 TRAPPC6BQ86SZ2 158 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR2AK2Q8NG84 335 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR11H6Q8NGC7 330 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR51D1Q8NGF3 324 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR5D13Q8NGL4 314 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 MYDGFQ969H8 173 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 ITFG2Q969R8 447 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 CREB3L1Q96BA8 519 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 ZNF714Q96N38 554 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 MGLLQ99685 303 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 PARP12Q9H0J9 701 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 METTL9Q9H1A3 318 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 OR51E2Q9H255 320 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 TMEM133Q9H2Q1 129 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 METTL8Q9H825 291 aaKnown RBP3.36□□□□□ -1.87
SPG11-211ENST00000558561 HEXA-AS1Q9H8Q6 139 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 ACOT13Q9NPJ3 140 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 C8orf4Q9NR00 106 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 SCN3BQ9NY72 215 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 LINC00527Q9UJ94 153 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 PSG11Q9UQ72 335 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 TPRKBQ9Y3C4 175 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 PEX16Q9Y5Y5 336 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 SESN1Q9Y6P5 492 aa3.36□□□□□ -1.87
SPG11-211ENST00000558561 KBTBD11-OT1A0A1B0GTJ5 212 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 IRGMA1A4Y4 181 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 CLPSL1A2RUU4 121 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 FOXI3A8MTJ6 420 aaPredicted RBP3.35□□□□□ -1.87
SPG11-211ENST00000558561 TMEM14DPA8MWL7 114 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 C12orf77C9JDV5 145 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 BUB1B-PAK6H3BSN5 160 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 J3QR06 171 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 MAGEB3O15480 346 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 CRTAPO75718 401 aaPredicted RBP3.35□□□□□ -1.87
SPG11-211ENST00000558561 TSPAN9O75954 239 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 CYB5AP00167 134 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 CD2P06729 351 aa3.35□□□□□ -1.87
SPG11-211ENST00000558561 FBP1P09467 338 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms