RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 DENND4AQ7Z401 1863 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 PQLC2LA1A4F0 135 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 A8MXE2 369 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 NEURL1O76050 574 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 PRO1933Q9H354 126 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 AKAP6Q13023 2319 aa13.18□□□□□ -0.3
AP4E1-202ENST00000558439 HBZP02008 142 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 MBP02144 154 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 LYPD6Q86Y78 171 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 LYG1Q8N1E2 194 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 ZNF318Q5VUA4 2279 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 TGIF2-C20orf24A0A0A6YYL0 155 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 ZNF320A2RRD8 509 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 ENSAO43768 121 aaKnown RBP13.17□□□□□ -0.3
AP4E1-202ENST00000558439 LILRA1O75019 489 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 UCP1P25874 307 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 CLDN18P56856 261 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 M0R296 226 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 PAGE4O60829 102 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 B3GALT5-AS1P59052 145 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 DUXBA0A1W2PPF3 345 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 BSXQ3C1V8 233 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 KHDC3LQ587J8 217 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 DRAM1Q8N682 238 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 CXXC4Q9H2H0 198 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 IL36GQ9NZH8 169 aa13.17□□□□□ -0.3
AP4E1-202ENST00000558439 BCL2P10415 239 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 SSMEM1Q8WWF3 244 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM147Q9BVK8 224 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 VAX2Q9UIW0 290 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 MED13LQ71F56 2210 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 MMP7P09237 267 aaPredicted RBP13.16□□□□□ -0.3
AP4E1-202ENST00000558439 UHRF2Q96PU4 802 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 SAMD10Q9BYL1 202 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 OOEPA6NGQ2 149 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 CD5P06127 495 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 CDC34P49427 236 aaPredicted RBP13.16□□□□□ -0.3
AP4E1-202ENST00000558439 HIST1H3AP68431 136 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 WFDC8Q8IUA0 241 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 GLRX2Q9NS18 164 aa13.16□□□□□ -0.3
AP4E1-202ENST00000558439 MGST1P10620 155 aaKnown RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 GALR1P47211 349 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 COL10A1Q03692 680 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 DTX1Q86Y01 620 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 MRPL30Q8TCC3 161 aaKnown RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 DYNLRB1Q9NP97 96 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 PLSCR2Q9NRY7 297 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 CEACAM18A8MTB9 384 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 GLIPR1P48060 266 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 BATFQ16520 125 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 SAXO1Q8IYX7 474 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 KLF14Q8TD94 323 aaPredicted RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 TMEM45BQ96B21 275 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 GMPPAQ96IJ6 420 aaPredicted RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 DDA1Q9BW61 102 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 LINC00470Q9BZP3 86 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 OR7C2O60412 319 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 WDR25Q64LD2 544 aaPredicted RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 FAM214BQ7L5A3 538 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 MOGAT3Q86VF5 341 aa13.15□□□□□ -0.3
AP4E1-202ENST00000558439 H1FOOQ8IZA3 346 aaPredicted RBP13.15□□□□□ -0.3
AP4E1-202ENST00000558439 DVL1O14640 695 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 ACP1P24666 158 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 SSTR5P35346 364 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 MRGPRGQ86SM5 289 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 RBKSQ9H477 322 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 BDP1A6H8Y1 2624 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 TRAV24A0A0B4J272 114 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 LY86O95711 162 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 SMIM6P0DI80 62 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 COX5BP10606 129 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 PLPPR1Q8TBJ4 325 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 PRRC2CQ9Y520 2896 aaKnown RBP13.14□□□□□ -0.31
AP4E1-202ENST00000558439 SPINK4O60575 86 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 ZG16O60844 167 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 LINC00596Q86U02 117 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 ABCA4P78363 2273 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 MED13Q9UHV7 2174 aa13.14□□□□□ -0.31
AP4E1-202ENST00000558439 COLCA2A8K830 154 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 S1PR2O95136 353 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 OR4D5Q8NGN0 318 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
AP4E1-202ENST00000558439 DCTN5Q9BTE1 182 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 ZFHX2Q9C0A1 2572 aaPredicted RBP13.13□□□□□ -0.31
AP4E1-202ENST00000558439 GFRA1P56159 465 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 ZNF90Q03938 601 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TMEM56Q96MV1 263 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 PKIBQ9C010 78 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 DOK5Q9P104 306 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 TMEM56-RWDD3S4R434 201 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 HSPB1P04792 205 aaKnown RBP13.13□□□□□ -0.31
AP4E1-202ENST00000558439 SSX2Q16385 188 aa13.13□□□□□ -0.31
AP4E1-202ENST00000558439 LRFN3Q9BTN0 628 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms