RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 KIR2DS2P43631 304 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 RPP30P78346 268 aaKnown RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 KHDC3LQ587J8 217 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 SOHLH1Q5JUK2 328 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 SLC25A24Q6NUK1 477 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 WDR82Q6UXN9 313 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 TMEM182Q6ZP80 229 aaPredicted RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 Q6ZS92 163 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 CENPVQ7Z7K6 275 aaPredicted RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 FGFRL1Q8N441 504 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 ZNF610Q8N9Z0 462 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 FAM213BQ8TBF2 198 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 BSCL2Q96G97 398 aaPredicted RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 SNX22Q96L94 193 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 SCRT1Q9BWW7 348 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 MRPL37Q9BZE1 423 aaKnown RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 EGLN1Q9GZT9 426 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 ESRP2Q9H6T0 727 aaKnown RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 PSENENQ9NZ42 101 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 OR1A1Q9P1Q5 309 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 METTL1Q9UBP6 276 aaKnown RBP6.99□□□□□ -1.29
SPG11-209ENST00000558253 CACNG5Q9UF02 275 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 JPT1Q9UK76 154 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 PPP1R3CQ9UQK1 317 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 FAM96BQ9Y3D0 163 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 DMRT1Q9Y5R6 373 aa6.99□□□□□ -1.29
SPG11-209ENST00000558253 MYO7BQ6PIF6 2116 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 TRAV20A0A0B4J274 112 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 B4DEV8 164 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 C12orf77C9JDV5 145 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 MGST3O14880 152 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 AGPAT2O15120 278 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 RBFOX2O43251 390 aaKnown RBP eCLIP6.98□□□□□ -1.29
SPG11-209ENST00000558253 TNFSF12O43508 249 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 CLDN14O95500 239 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 IGKV1-5P01602 117 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 HBZP02008 142 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 CRYAAP02489 173 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 PTAFRP25105 342 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 PRDX2P32119 198 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 OR3A1P47881 315 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 PPT1P50897 306 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 NOVA1P51513 510 aaKnown RBP6.98□□□□□ -1.29
SPG11-209ENST00000558253 EIF4EBP1Q13541 118 aaPredicted RBP6.98□□□□□ -1.29
SPG11-209ENST00000558253 CLINT1Q14677 625 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 ZNF585BQ52M93 769 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 ZNF506Q5JVG8 444 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 C1orf185Q5T7R7 199 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 SP5Q6BEB4 398 aaPredicted RBP6.98□□□□□ -1.29
SPG11-209ENST00000558253 VWA1Q6PCB0 445 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 MBD3L1Q8WWY6 194 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 P2RX4Q99571 388 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 MAGT1Q9H0U3 335 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 SH3BGRL3Q9H299 93 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 TMEM231Q9H6L2 316 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 UFSP2Q9NUQ7 469 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 OR6C3Q9NZP0 311 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 DKK4Q9UBT3 224 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 HSPB7Q9UBY9 170 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 ZDBF2Q9HCK1 2354 aa6.98□□□□□ -1.29
SPG11-209ENST00000558253 A0A087WWC5 75 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 CXorf65A6NEN9 183 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 C5orf52A6NGY3 159 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 LRRC30A6NM36 301 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 LINC00587B1AMM8 73 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 SRRM5B3KS81 715 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 H0YL77 283 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 PPIHO43447 177 aaKnown RBP6.97□□□□□ -1.29
SPG11-209ENST00000558253 PSPNO60542 156 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 YPEL1O60688 119 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 EIF3GO75821 320 aaKnown RBP eCLIP6.97□□□□□ -1.29
SPG11-209ENST00000558253 CST7O76096 145 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 TMEM50AO95807 157 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 IFNA1P01562 189 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 IFNA10P01566 189 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 IGKV1-39P01597 117 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 IGKV1D-39P04432 117 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 P0C879 139 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 EPHA1P21709 976 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 TNFSF4P23510 183 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 OMGP23515 440 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 MAS1LP35410 378 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 GATA4P43694 442 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 NPBWR1P48145 328 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 RAB7AP51149 207 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 FABP6P51161 128 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 KLF3P57682 345 aaPredicted RBP6.97□□□□□ -1.29
SPG11-209ENST00000558253 UBE2KP61086 200 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 ERVS71-1P61550 626 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 TNFRSF9Q07011 255 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 LRRC75BQ2VPJ9 315 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 AARDQ4LEZ3 155 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 CLEC9AQ6UXN8 241 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 MYPOPQ86VE0 399 aaPredicted RBP6.97□□□□□ -1.29
SPG11-209ENST00000558253 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.97□□□□□ -1.29
SPG11-209ENST00000558253 NANPQ8TBE9 248 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 TMEM171Q8WVE6 324 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
SPG11-209ENST00000558253 DIRC2Q96SL1 478 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms