RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 PDCD5O14737 125 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 ZBTB25P24278 435 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 CDX1P47902 265 aaPredicted RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 THBS3P49746 956 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 RPS25P62851 125 aaKnown RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 FABP5Q01469 135 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 FOXE3Q13461 319 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 RAB11BQ15907 218 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 C2orf76Q3KRA6 126 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 FAM53AQ6NSI3 398 aaPredicted RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 CD200R1LQ6Q8B3 271 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 C10orf99Q6UWK7 81 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 ZNF367Q7RTV3 350 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 NPBQ8NG41 125 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 OR56B1Q8NGI3 324 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 PTX4Q96A99 478 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 PHF21AQ96BD5 680 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 FAM3DQ96BQ1 224 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 NOL4LQ96MY1 436 aaPredicted RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 RNF5Q99942 180 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 YTHDF1Q9BYJ9 559 aaKnown RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 SLC23A1Q9UHI7 598 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 RAB22AQ9UL26 194 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 AK6Q9Y3D8 172 aaKnown RBP7.96□□□□□ -1.14
USP3-207ENST00000558218 U3KQE9 123 aa7.96□□□□□ -1.14
USP3-207ENST00000558218 TRDV1A0A1B0GX56 115 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 LINC01548A6NM66 108 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 LDLRAD4O15165 306 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 SOCS1O15524 211 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 DIRAS3O95661 229 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 IGHG4P01861 327 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 CALRP27797 417 aaKnown RBP7.95□□□□□ -1.14
USP3-207ENST00000558218 PPP1CCP36873 323 aaKnown RBP7.95□□□□□ -1.14
USP3-207ENST00000558218 SERPINB10P48595 397 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 F2RL1P55085 397 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 TMEM50BP56557 158 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 GABARAPL2P60520 117 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 KIR2DS1Q14954 304 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 P2RY14Q15391 338 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 CXorf66Q5JRM2 361 aaPredicted RBP7.95□□□□□ -1.14
USP3-207ENST00000558218 KHDC1LQ5JSQ8 128 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 ZNF695Q8IW36 515 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 LINC00482Q8N8I6 264 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 CNBD2Q96M20 576 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 GFI1Q99684 422 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 NABP2Q9BQ15 211 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 ZNF251Q9BRH9 671 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 AGMATQ9BSE5 352 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 NICN1Q9BSH3 213 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 TOLLIPQ9H0E2 274 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 CHMP1AQ9HD42 196 aaPredicted RBP7.95□□□□□ -1.14
USP3-207ENST00000558218 Q9N2K0 584 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 C12orf4Q9NQ89 552 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 GAB2Q9UQC2 676 aa7.95□□□□□ -1.14
USP3-207ENST00000558218 A0A0A6YYD4 124 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 OR5H14A6NHG9 310 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 DENRO43583 198 aaKnown RBP7.94□□□□□ -1.14
USP3-207ENST00000558218 RBBP9O75884 186 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 HLA-DRB1P01911 266 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 IGLL1P15814 213 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 VDAC1P21796 283 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 MAP2K4P45985 399 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 ACTBP60709 375 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 TAGLNQ01995 201 aaKnown RBP7.94□□□□□ -1.14
USP3-207ENST00000558218 CFHR3Q02985 330 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 GNMTQ14749 295 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 ARL6IP1Q15041 203 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 FOXB2Q5VYV0 432 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 LIN54Q6MZP7 749 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
USP3-207ENST00000558218 IL1F10Q8WWZ1 152 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 P2RX4Q99571 388 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 CMSS1Q9BQ75 279 aaKnown RBP7.94□□□□□ -1.14
USP3-207ENST00000558218 IFI27L2Q9H2X8 130 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 Q9H521 79 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 NDUFB11Q9NX14 153 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 ZNF107Q9UII5 783 aaPredicted RBP7.94□□□□□ -1.14
USP3-207ENST00000558218 AK3Q9UIJ7 227 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 TGP01266 2768 aa7.94□□□□□ -1.14
USP3-207ENST00000558218 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 SAA2-SAA4A0A096LPE2 208 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 METTL21EPA6NDL7 271 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 IFITM5A6NNB3 132 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 TRDCB7Z8K6 153 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 NBR2O15453 112 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 HSPA12AO43301 675 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 NDUFA3O95167 84 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 SAA2P0DJI9 122 aaPredicted RBP7.93□□□□□ -1.14
USP3-207ENST00000558218 FGF9P31371 208 aaPredicted RBP7.93□□□□□ -1.14
USP3-207ENST00000558218 CEACAM6P40199 344 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 VEGFCP49767 419 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 HLA-DRB3P79483 266 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 MRPS15P82914 257 aaKnown RBP7.93□□□□□ -1.14
USP3-207ENST00000558218 EGFEM1PQ0D2K5 195 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 MMDQ15546 238 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 SSX1Q16384 188 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 SRSF7Q16629 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP3-207ENST00000558218 C5orf64Q2M2E5 130 aa7.93□□□□□ -1.14
USP3-207ENST00000558218 ZNF660Q6AZW8 331 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms