RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 P2RY4P51582 365 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 PSG3Q16557 428 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 THEM4Q5T1C6 240 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ATAD3CQ5T2N8 411 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 Q5VSD8 79 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ANKRD26P1Q6NSI1 321 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ULK3Q6PHR2 472 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 LYPD6Q86Y78 171 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 FUNDC1Q8IVP5 155 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 MS4A15Q8N5U1 240 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 SLC30A7Q8NEW0 376 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ZNF420Q8TAQ5 688 aaPredicted RBP4.06□□□□□ -1.76
RTF1-204ENST00000558117 IL1F10Q8WWZ1 152 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 RCN3Q96D15 328 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 SLC29A1Q99808 456 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 CTPS2Q9NRF8 586 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ACER3Q9NUN7 267 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 C1orf109Q9NX04 203 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 CCDC167Q9P0B6 97 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 ENPP5Q9UJA9 477 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 FBXL3Q9UKT7 428 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 POFUT2Q9Y2G5 429 aa4.06□□□□□ -1.76
RTF1-204ENST00000558117 RAB19A4D1S5 217 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 VGLL3A8MV65 326 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 TRDCB7Z8K6 153 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 GYG2O15488 501 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 GMDSO60547 372 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 OR7A10O76100 309 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 CCNB2O95067 398 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 KRT16P08779 473 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 NQO2P16083 231 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 FGF9P31371 208 aaPredicted RBP4.05□□□□□ -1.76
RTF1-204ENST00000558117 NUDT2P50583 147 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 DAP3P51398 398 aaKnown RBP4.05□□□□□ -1.76
RTF1-204ENST00000558117 RND3P61587 244 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 NAA20P61599 178 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 ERVK-25P63136 954 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 EMX2Q04743 252 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 TRIM16LQ309B1 348 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 SOHLH1Q5JUK2 328 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 LCE3EQ5T5B0 92 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 GPR107Q5VW38 600 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 METTL21CQ5VZV1 264 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 HCP5Q6MZN7 132 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 NOXRED1Q6NXP6 359 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 Q6ZR03 302 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 ZNF695Q8IW36 515 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 SELENOHQ8IZQ5 122 aaKnown RBP4.05□□□□□ -1.76
RTF1-204ENST00000558117 INO80EQ8NBZ0 244 aaPredicted RBP4.05□□□□□ -1.76
RTF1-204ENST00000558117 LY6G5BQ8NDX9 201 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 BEST4Q8NFU0 473 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 OR2T33Q8NG76 320 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 RAB3CQ96E17 227 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 PPP3R2Q96LZ3 170 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 OXGR1Q96P68 337 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 THTPAQ9BU02 230 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 SLC19A3Q9BZV2 496 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 AIG1Q9NVV5 245 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 TAS2R1Q9NYW7 299 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 VPS29Q9UBQ0 182 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 ZNF229Q9UJW7 825 aa4.05□□□□□ -1.76
RTF1-204ENST00000558117 GNG14A0A1W2PPG7 69 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 FCN1O00602 326 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 MRASO14807 208 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 PRKYO43930 277 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 EIF4E2O60573 245 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 UBL3O95164 117 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 CPSF4O95639 269 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 C1QCP02747 245 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 NR2C1P13056 603 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 IDO1P14902 403 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 NQO1P15559 274 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 SDC1P18827 310 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 FKBP2P26885 142 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 NTSP30990 170 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 DDOSTP39656 456 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 PRKXP51817 358 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 POLR2JP52435 117 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 C2orf80Q0P641 193 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 GNMTQ14749 295 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 KIAA0040Q15053 153 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 DEFB136Q30KP8 78 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 PAGE3Q5JUK9 113 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 CCNJQ5T5M9 372 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 AP1ARQ63HQ0 302 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 ZNF836Q6ZNA1 936 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 COMMD6Q7Z4G1 85 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 ZNF429Q86V71 674 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 SGPP2Q8IWX5 399 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 DEFB107AQ8IZN7 70 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 OSR2Q8N2R0 312 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 JAGN1Q8N5M9 183 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 OR2Z1Q8NG97 314 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 SLC25A40Q8TBP6 338 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 KLF14Q8TD94 323 aaPredicted RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 C16orf78Q8WTQ4 265 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 UFD1Q92890 307 aa4.04□□□□□ -1.76
RTF1-204ENST00000558117 EXOSC8Q96B26 276 aaKnown RBP4.04□□□□□ -1.76
RTF1-204ENST00000558117 CMTM5Q96DZ9 223 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms