RNA–Protein interactions for RNA: ENST00000558088.1

VPS13C-205, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-205ENST00000558088 TRBV6-7A0A0A0MS04 114 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 PHYHO14832 338 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 AKR7A2O43488 359 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 CIAO1O76071 339 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 CD8AP01732 235 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 TSPOP30536 169 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 RCVRNP35243 200 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 YLPM1P49750 1951 aaKnown RBP0□□□□□ -2.41
VPS13C-205ENST00000558088 TAS2R30P59541 319 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 TAS2R20P59543 309 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 LRRC74AQ0VAA2 488 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 Q1T7F1 81 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 TRMT12Q53H54 448 aaKnown RBP0□□□□□ -2.41
VPS13C-205ENST00000558088 HSP90AA4PQ58FG1 418 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 FAM173BQ6P4H8 233 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 SLC22A24Q8N4F4 322 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 PACRGLQ8N7B6 248 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 ZNF439Q8NDP4 499 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 CCDC112Q8NEF3 446 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 OR4P4Q8NGL7 312 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 RPS4Y2Q8TD47 263 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 GLYATL2Q8WU03 294 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 DISP1Q96F81 1524 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 ABHD14BQ96IU4 210 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 VAPAQ9P0L0 249 aa0□□□□□ -2.41
VPS13C-205ENST00000558088 GOLGA8IPA6NC78 632 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 H3BSA7 217 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 BHLHE40O14503 412 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 MBP02144 154 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 DEFA4P12838 97 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 GALP22466 123 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 NPPCP23582 126 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CRYBB3P26998 211 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 RPA3P35244 121 aaPredicted RBP-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 PSMB3P49720 205 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 TAS2R45P59539 299 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 BAXQ07812 192 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 ARHGAP11BQ3KRB8 267 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 C6orf183Q5T699 404 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 LAMTOR1Q6IAA8 161 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 SCGB1D4Q6XE38 83 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 YIPF7Q8N8F6 280 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 OR4A15Q8NGL6 344 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 PATE1Q8WXA2 126 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 SERPINI1Q99574 410 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 CIB1Q99828 191 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 SMR3AQ99954 134 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 FAM215AQ9Y5M1 114 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 NAV2Q8IVL1 2488 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 ATAD5Q96QE3 1844 aa-0.01□□□□□ -2.41
VPS13C-205ENST00000558088 MAST4O15021 2626 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 C8orf87E5RJ46 101 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 CREBL2O60519 120 aaPredicted RBP-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 PSMG1O95456 288 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 PRH1P02810 166 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SERPINA7P05543 415 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 CCL3P10147 92 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 GADD45AP24522 165 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ALDH3A1P30838 453 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 OR1E2P47887 323 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 DAOAP59103 153 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 UBE2KP61086 200 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 ACTL10Q5JWF8 245 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 PIP5KL1Q5T9C9 394 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 SPICQ8N5J4 248 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 OR6K2Q8NGY2 324 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 IFT81Q8WYA0 676 aa-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 MYCBPQ99417 103 aaPredicted RBP-0.02□□□□□ -2.41
VPS13C-205ENST00000558088 AQRO60306 1485 aaKnown RBP eCLIP-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 GRIN2BQ13224 1484 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 APCP25054 2843 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 CACNA1BQ00975 2339 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 FAT4Q6V0I7 4981 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TRAV14DV4A0A0A6YYC5 116 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TRAPPC13A5PLN9 417 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 RFXANKO14593 260 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 ITGB1BP1O14713 200 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 EPPINO95925 133 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TRGC1P0CF51 173 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 IFNGR2P38484 337 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 CD79BP40259 229 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 PAFAH1B3Q15102 231 aaKnown RBP-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 FAM183BPQ6ZVS7 135 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 MTERF4Q7Z6M4 381 aaKnown RBP-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TMEM86AQ8N2M4 240 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 DAND5Q8N907 189 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TMEM75Q8N9X5 138 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 OR1L8Q8NGR8 309 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 OR13C8Q8NGS7 320 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 OR6N2Q8NGY6 317 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 CATSPER2Q96P56 530 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 OR51E2Q9H255 320 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TRABDQ9H4I3 376 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 RGCCQ9H4X1 137 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TMBIM4Q9HC24 238 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 IFT46Q9NQC8 304 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 NIT2Q9NQR4 276 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 TMEM216Q9P0N5 145 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 HHLA2Q9UM44 414 aa-0.03□□□□□ -2.41
VPS13C-205ENST00000558088 MYH11P35749 1972 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms