RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 OR5H14A6NHG9 310 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 G3V318 75 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 H7C2Y5 167 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 I3L521 148 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 CDK1P06493 297 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 ZBTB25P24278 435 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 LAIR2Q6ISS4 152 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 MINDY2Q8NBR6 621 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 EDARADDQ8WWZ3 215 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 RITA1Q96K30 269 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 PRR25Q96S07 402 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 RNF5Q99942 180 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 FKBP14Q9NWM8 211 aa10.6□□□□□ -0.71
SNRPA1-204ENST00000558020 ERICH4A6NGS2 130 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 ITGB1BP1O14713 200 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 SLC22A1O15245 554 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 HSPA12AO43301 675 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 RBBP9O75884 186 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 NDUFA3O95167 84 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 LY86O95711 162 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 NAPSAO96009 420 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 CNTFRP26992 372 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 MED22Q15528 200 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 OGFRL1Q5TC84 451 aaPredicted RBP10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 PYHIN1Q6K0P9 492 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 LRRTM1Q86UE6 522 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 SVOPQ8N4V2 548 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 OR6M1Q8NGM8 313 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 ABHD5Q8WTS1 349 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 OR5B12Q96R08 314 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 TM2D1Q9BX74 207 aa10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 FOXA2Q9Y261 457 aaPredicted RBP10.59□□□□□ -0.71
SNRPA1-204ENST00000558020 RRHO14718 337 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 OVOL1O14753 267 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 CASQ2O14958 399 aaPredicted RBP10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 ARSBP15848 533 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 CEACAM6P40199 344 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 INSL4Q14641 139 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 TRAM1Q15629 374 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 FAM131AQ6UXB0 335 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 C5orf24Q7Z6I8 188 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 RBMXL1Q96E39 390 aaKnown RBP10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 GNB4Q9HAV0 340 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 WASHC3Q9Y3C0 194 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 SMAD5-AS1Q9Y6J3 95 aa10.58□□□□□ -0.72
SNRPA1-204ENST00000558020 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 A0A1W2PN81 502 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 TMEM14DPA8MWL7 114 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 ARPC1BO15143 372 aaKnown RBP10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 ARL6IP5O75915 188 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 UCHL1P09936 223 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CT45A6P0DMU7 189 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CT45A5P0DMU8 189 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CT45A7P0DMV0 189 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CD37P11049 281 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CHRNA7P36544 502 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 PSMD7P51665 324 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 CX3CL1P78423 397 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 ECSCRQ19T08 205 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 AKIRIN2Q53H80 203 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 ZNF880Q6PDB4 577 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 UFD1Q92890 307 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 FLYWCH2Q96CP2 140 aaKnown RBP10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 TSNAXQ99598 290 aaKnown RBP10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 FBXL15Q9H469 300 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 ZNF221Q9UK13 617 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 HSF4Q9ULV5 492 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 TPRKBQ9Y3C4 175 aa10.57□□□□□ -0.72
SNRPA1-204ENST00000558020 LINC01619G3V211 115 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 SAP30O75446 220 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 CPEP16870 476 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 PSMA1P25786 263 aaKnown RBP10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 CRIP2P52943 208 aaPredicted RBP10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 GNB1P62873 340 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 QRFPP83859 136 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 UNC119Q13432 240 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 ACTBL2Q562R1 376 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 RPL39P5Q59GN2 51 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 CD200R1LQ6Q8B3 271 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 ZNF562Q6V9R5 426 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 PPP1R27Q86WC6 154 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 OR5AN1Q8NGI8 311 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 DCUN1D4Q92564 292 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 ABHD14BQ96IU4 210 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 AGMATQ9BSE5 352 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 NICN1Q9BSH3 213 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 C11orf54Q9H0W9 315 aaPredicted RBP10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 SLA2Q9H6Q3 261 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 C12orf4Q9NQ89 552 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 NUBP2Q9Y5Y2 271 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 A3GALT2U3KPV4 340 aa10.56□□□□□ -0.72
SNRPA1-204ENST00000558020 H0YJW9 148 aa10.55□□□□□ -0.72
SNRPA1-204ENST00000558020 SLC17A2O00624 439 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms