RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 FAM71F2Q6NXP2 309 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 CCBE1Q6UXH8 406 aaPredicted RBP13.44□□□□□ -0.26
PBX4-202ENST00000557978 HOGA1Q86XE5 327 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 DRAM1Q8N682 238 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 BEST4Q8NFU0 473 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 OR56B4Q8NH76 319 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 SPATA3Q8NHX4 192 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 CFHR4Q92496 578 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 AGMATQ9BSE5 352 aa13.44□□□□□ -0.26
PBX4-202ENST00000557978 C11orf54Q9H0W9 315 aaPredicted RBP13.44□□□□□ -0.26
PBX4-202ENST00000557978 MRPS7Q9Y2R9 242 aaKnown RBP13.44□□□□□ -0.26
PBX4-202ENST00000557978 IGKV1D-8A0A087WSZ0 117 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 ST8SIA5O15466 376 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 TPPPO94811 219 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 SAA2P0DJI9 122 aaPredicted RBP13.43□□□□□ -0.26
PBX4-202ENST00000557978 PTHLHP12272 177 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 CD24P25063 80 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 HES1Q14469 280 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 TMEM219Q86XT9 240 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 C15orf40Q8WUR7 153 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 NPFFR1Q9GZQ6 430 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 RBM38Q9H0Z9 239 aaKnown RBP13.43□□□□□ -0.26
PBX4-202ENST00000557978 IFI27L2Q9H2X8 130 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 RANBP3Q9H6Z4 567 aaPredicted RBP13.43□□□□□ -0.26
PBX4-202ENST00000557978 BEX1Q9HBH7 125 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 IFT46Q9NQC8 304 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 NDUFA13Q9P0J0 144 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 ZNF221Q9UK13 617 aa13.43□□□□□ -0.26
PBX4-202ENST00000557978 TSPAN9O75954 239 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 SNRNP70P08621 437 aaKnown RBP13.42□□□□□ -0.26
PBX4-202ENST00000557978 CD1BP29016 333 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 ARPC4P59998 168 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 C12orf54Q6X4T0 127 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 ZNF833PQ6ZTB9 187 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 GVQW1Q8N7I0 195 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 EXTL2Q9UBQ6 330 aa13.42□□□□□ -0.26
PBX4-202ENST00000557978 RBM7Q9Y580 266 aaKnown RBP13.42□□□□□ -0.26
PBX4-202ENST00000557978 CTDSP2O14595 271 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 OR2F2O95006 317 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 RELBQ01201 579 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 Q6ZSV7 163 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 OR4C13Q8NGP0 309 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 OR2T10Q8NGZ9 312 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 ABHD14BQ96IU4 210 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 RBM14Q96PK6 669 aaKnown RBP13.41□□□□□ -0.26
PBX4-202ENST00000557978 SLC25A33Q9BSK2 321 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 SLIRPQ9GZT3 109 aaKnown RBP13.41□□□□□ -0.26
PBX4-202ENST00000557978 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
PBX4-202ENST00000557978 PARP12Q9H0J9 701 aaKnown RBP13.41□□□□□ -0.26
PBX4-202ENST00000557978 SCPEP1Q9HB40 452 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 MMP24Q9Y5R2 645 aa13.41□□□□□ -0.26
PBX4-202ENST00000557978 M0QZK8 103 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 SULT1C2O00338 296 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 CHST1O43916 411 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 IGKV1D-33P01593 117 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 IGKV1-33P01594 117 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 TMEM11P17152 192 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 GPR12P47775 334 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 OR3A3P47888 321 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 EBI3Q14213 229 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 AWAT1Q58HT5 328 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 SNX29P2Q8IUI4 249 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 H1FOOQ8IZA3 346 aaPredicted RBP13.4□□□□□ -0.26
PBX4-202ENST00000557978 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.4□□□□□ -0.26
PBX4-202ENST00000557978 C16orf95Q9H693 158 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 NECAP2Q9NVZ3 263 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 RABL2AQ9UBK7 228 aaPredicted RBP13.4□□□□□ -0.26
PBX4-202ENST00000557978 RABL2BQ9UNT1 228 aa13.4□□□□□ -0.26
PBX4-202ENST00000557978 IGHV3-72A0A0B4J1Y9 119 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 MEIS3P1A6NDR6 274 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR8U9P0C7N5 309 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR5AP2Q8NGF4 316 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR8U1Q8NH10 309 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 MCFD2Q8NI22 146 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 TAF15Q92804 592 aaKnown RBP eCLIP13.39□□□□□ -0.27
PBX4-202ENST00000557978 ZNF251Q9BRH9 671 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 PRSS22Q9GZN4 317 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 MIXL1Q9H2W2 232 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 RNF150Q9ULK6 438 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 GAB2Q9UQC2 676 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR2W1Q9Y3N9 320 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 MOSP00540 346 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 MDKP21741 143 aaPredicted RBP13.39□□□□□ -0.27
PBX4-202ENST00000557978 LSAMPQ13449 338 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 LAX1Q8IWV1 398 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 LINC01006Q8NI28 216 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 GPX8Q8TED1 209 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 DGCR14Q96DF8 476 aaKnown RBP13.39□□□□□ -0.27
PBX4-202ENST00000557978 DIRAS2Q96HU8 199 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 EAF1Q96JC9 268 aaPredicted RBP13.39□□□□□ -0.27
PBX4-202ENST00000557978 NABP2Q9BQ15 211 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 DCUN1D5Q9BTE7 237 aa13.39□□□□□ -0.27
PBX4-202ENST00000557978 NXF2Q9GZY0 626 aaKnown RBP13.39□□□□□ -0.27
PBX4-202ENST00000557978 OR2D2Q9H210 308 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms