RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 ZNF492Q9P255 531 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 TBX21Q9UL17 535 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 CARHSP1Q9Y2V2 147 aaKnown RBP2.51□□□□□ -2.01
TDP1-217ENST00000557782 SCN1AP35498 2009 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 NUP205Q92621 2012 aa2.51□□□□□ -2.01
TDP1-217ENST00000557782 PBRM1Q86U86 1689 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PLXNB3Q9ULL4 1909 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 IGLV4-69A0A075B6H9 119 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 IGHV3-43A0A0B4J1X8 118 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 A0A1B0GV72 72 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PINLYPA6NC86 204 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 GOLGA6L4A6NEF3 574 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 LEUTXA8MZ59 168 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 CGAP01215 116 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 OR5AC1P0C628 307 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 GABRA3P34903 492 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 TMEM33P57088 247 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 DSCR10P59022 87 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 ARHGAP11BQ3KRB8 267 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 MKXQ8IYA7 352 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 C20orf196Q8IYI0 205 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 ZNF101Q8IZC7 436 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 TBC1D19Q8N5T2 526 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 Q8N7P7 452 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 ZNF676Q8N7Q3 588 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 LY6G5BQ8NDX9 201 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 KCTD4Q8WVF5 259 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 ITLN2Q8WWU7 325 aaPredicted RBP2.5□□□□□ -2.01
TDP1-217ENST00000557782 CMBLQ96DG6 245 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 MS4A6EQ96DS6 147 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 RMI2Q96E14 147 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PPP1R2P1Q96PQ5 205 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 KLF6Q99612 283 aaPredicted RBP2.5□□□□□ -2.01
TDP1-217ENST00000557782 HOPXQ9BPY8 73 aaPredicted RBP2.5□□□□□ -2.01
TDP1-217ENST00000557782 PLA2G2FQ9BZM2 168 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PCBD2Q9H0N5 130 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 FAM60AQ9NP50 221 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 OPTCQ9UBM4 332 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 VPREB3Q9UKI3 123 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PKIGQ9Y2B9 76 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 PXMP4Q9Y6I8 212 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 CCDC180Q9P1Z9 1646 aa2.5□□□□□ -2.01
TDP1-217ENST00000557782 ITGB4P16144 1822 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 BRWD3Q6RI45 1802 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 PCM1Q15154 2024 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 IGHV3OR15-7A0A075B7D8 119 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 GNG14A0A1W2PPG7 69 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 OR4C46A6NHA9 309 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 OR5H14A6NHG9 310 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 C4orf51C9J302 202 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 M0R381 172 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 PDE6DO43924 150 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 GPR75O95800 540 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 NRASP01111 189 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 HRASP01112 189 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 KRASP01116 189 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 IGLV3-27P01718 113 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 GUSBP08236 651 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 FGF6P10767 208 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ZNF19P17023 458 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 HIST1H1TP22492 207 aaPredicted RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 CDK2P24941 298 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 OR10J1P30954 320 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ARPC4P59998 168 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 BTN3A2P78410 334 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 NDPQ00604 133 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 IAH1Q2TAA2 248 aaPredicted RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 PLPPR5Q32ZL2 321 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 SP6Q3SY56 376 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ZCWPW2Q504Y3 356 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 TEX36Q5VZQ5 186 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 LPCAT3Q6P1A2 487 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 PRSS54Q6PEW0 395 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ALKAL1Q6UXT8 129 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 AMN1Q8IY45 258 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 KRTCAP2Q8N6L1 136 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 OR2T27Q8NH04 317 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 OR4A5Q8NH83 315 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 LHFPL5Q8TAF8 219 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 PYDC1Q8WXC3 89 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 SHANK2-AS3Q9BTD1 123 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ALX4Q9H161 411 aaPredicted RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 BOLA2Q9H3K6 86 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ZNF430Q9H8G1 570 aaPredicted RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 INIPQ9NRY2 104 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 KCNIP2Q9NS61 270 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 MRPL27Q9P0M9 148 aaKnown RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 NYAP2Q9P242 653 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 DHCR7Q9UBM7 475 aaKnown RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 GRIN2BQ13224 1484 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 PLCH2O75038 1416 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 TNS2Q63HR2 1409 aa2.49□□□□□ -2.01
TDP1-217ENST00000557782 ZNF646O15015 1829 aaPredicted RBP2.49□□□□□ -2.01
TDP1-217ENST00000557782 TMED7-TICAM2A0A0A6YYA0 188 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 OR4C45A6NMZ5 311 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 GSTZ1O43708 216 aaPredicted RBP2.48□□□□□ -2.01
TDP1-217ENST00000557782 CCNKO75909 580 aa2.48□□□□□ -2.01
TDP1-217ENST00000557782 APOMO95445 188 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms