RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 PRRX1P54821 245 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 UBA52P62987 128 aaKnown RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 ZNF816Q0VGE8 651 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 SCGB2A2Q13296 93 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 CNPY1Q3B7I2 92 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 ZNF660Q6AZW8 331 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 CCBE1Q6UXH8 406 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 CCDC190Q86UF4 302 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 SNX29P2Q8IUI4 249 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 BEST4Q8NFU0 473 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 ZNF418Q8TF45 676 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 PHF21AQ96BD5 680 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 RBMXL1Q96E39 390 aaKnown RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 DUX5Q96PT3 197 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 ST6GALNAC5Q9BVH7 336 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 CHIAQ9BZP6 476 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 C6orf62Q9GZU0 229 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 C11orf54Q9H0W9 315 aaPredicted RBP7.24□□□□□ -1.25
CHD8-214ENST00000557727 MMP27Q9H306 513 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 RDH8Q9NYR8 311 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 SLC23A1Q9UHI7 598 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 HILPDAQ9Y5L2 63 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 V9GYH0 126 aa7.24□□□□□ -1.25
CHD8-214ENST00000557727 SAA2-SAA4A0A096LPE2 208 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 LEUTXA8MZ59 168 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 OOSP1A8MZH6 123 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 FAM25AB3EWG3 89 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 FAM25CB3EWG5 89 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 FAM25GB3EWG6 89 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 H3BUX3 64 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 HSD17B6O14756 317 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 CHST1O43916 411 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 IGLV2-14P01704 120 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 FCER2P06734 321 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 LPLP06858 475 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 RNASE1P07998 156 aaKnown RBP7.23□□□□□ -1.25
CHD8-214ENST00000557727 SAA2P0DJI9 122 aaPredicted RBP7.23□□□□□ -1.25
CHD8-214ENST00000557727 ZBTB25P24278 435 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 PRSS3P35030 304 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 TALDO1P37837 337 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 CEACAM6P40199 344 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 OR3A3P47888 321 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 RAB13P51153 203 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 LGALS4P56470 323 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 DGCR2P98153 550 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 BAMBIQ13145 260 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 ZNF79Q15937 498 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 LRRC75BQ2VPJ9 315 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 KRTAP24-1Q3LI83 254 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 ZNF833PQ6ZTB9 187 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 OR6Q1Q8NGQ2 317 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 OR52I2Q8NH67 350 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 SSMEM1Q8WWF3 244 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 RTN4IP1Q8WWV3 396 aaPredicted RBP7.23□□□□□ -1.25
CHD8-214ENST00000557727 TAF15Q92804 592 aaKnown RBP eCLIP7.23□□□□□ -1.25
CHD8-214ENST00000557727 SSX3Q99909 188 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 SCPEP1Q9HB40 452 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 RAB9BQ9NP90 201 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 KLK11Q9UBX7 282 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 MRPS7Q9Y2R9 242 aaKnown RBP7.23□□□□□ -1.25
CHD8-214ENST00000557727 RBMX2Q9Y388 322 aaKnown RBP7.23□□□□□ -1.25
CHD8-214ENST00000557727 FAM96BQ9Y3D0 163 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 POMT1Q9Y6A1 747 aa7.23□□□□□ -1.25
CHD8-214ENST00000557727 IGKV1D-13A0A0B4J2D9 117 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 IGHV1-3A0A0C4DH29 117 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 A6NDX4 124 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 ZNF736B4DX44 427 aaPredicted RBP7.22□□□□□ -1.25
CHD8-214ENST00000557727 SULT1C2O00338 296 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 TOR1AO14656 332 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 TIMM23O14925 209 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 BET1O15155 118 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 CTDSPLO15194 276 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 LANCL1O43813 399 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 RGS11O94810 467 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 IFNA2P01563 188 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 IGKV1-13P0DP09 117 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 S100A5P33763 92 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 ETV6P41212 452 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 CBX5P45973 191 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 REG1BP48304 166 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 MRPS15P82914 257 aaKnown RBP7.22□□□□□ -1.25
CHD8-214ENST00000557727 EIF4EBP1Q13541 118 aaPredicted RBP7.22□□□□□ -1.25
CHD8-214ENST00000557727 KRTAP21-3Q3LHN1 58 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 PLA1AQ53H76 456 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 OVCH2Q7RTZ1 564 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 OR2AK2Q8NG84 335 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 OR10X1Q8NGY0 326 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 SMIM4Q8WVI0 70 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 CREB3L1Q96BA8 519 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 DIRAS2Q96HU8 199 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 ABHD14BQ96IU4 210 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 MTFP1Q9UDX5 166 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 VPREB3Q9UKI3 123 aa7.22□□□□□ -1.25
CHD8-214ENST00000557727 AMMECR1Q9Y4X0 333 aaPredicted RBP7.22□□□□□ -1.25
CHD8-214ENST00000557727 GABARAPH6UMI1 98 aa7.21□□□□□ -1.26
CHD8-214ENST00000557727 GSTZ1O43708 216 aaPredicted RBP7.21□□□□□ -1.26
CHD8-214ENST00000557727 AMY1AP04745 511 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms