RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 ENTHD1Q8IYW4 607 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 FAM58AQ8N1B3 248 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 CENPSQ8N2Z9 138 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 OR2T29Q8NH02 315 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ASB17Q8WXJ9 295 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 RPEQ96AT9 228 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ORAI1Q96D31 301 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 DAZAP1Q96EP5 407 aaKnown RBP4.56□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF486Q96H40 463 aaPredicted RBP4.56□□□□□ -1.68
VPS33B-207ENST00000557470 NSL1Q96IY1 281 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 APOL4Q9BPW4 351 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 SLA2Q9H6Q3 261 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 MOB1AQ9H8S9 216 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 REEP1Q9H902 201 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 SEBOXQ9HB31 216 aaPredicted RBP4.56□□□□□ -1.68
VPS33B-207ENST00000557470 S100A14Q9HCY8 104 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 OR52A1Q9UKL2 312 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 R4GMQ9 66 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 SORL1Q92673 2214 aa4.56□□□□□ -1.68
VPS33B-207ENST00000557470 FAM240BA0A1B0GVZ2 78 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 ODAMA1E959 279 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 OR2H2O95918 312 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 IGKV1D-33P01593 117 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 IGKV1-33P01594 117 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 IGHV3-7P01780 117 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 HCKP08631 526 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 HSMCR30P0CW71 290 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 RAB4AP20338 218 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 BCL3P20749 454 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 NFYBP25208 207 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 PTGFRP43088 359 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CDKN1BP46527 198 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 GPR12P47775 334 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 POU3F4P49335 361 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 FUT6P51993 359 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 MTCP1P56278 107 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CDC42P60953 191 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CXCR4P61073 352 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CDK5Q00535 292 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 AESQ08117 197 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 FOXE3Q13461 319 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 GPR50Q13585 617 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 ODF4Q2M2E3 257 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 C17orf58Q2M2W7 97 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 SPIN3Q5JUX0 258 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 C1orf146Q5VVC0 180 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF322Q6U7Q0 402 aaPredicted RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 LINC00299Q6ZSB3 139 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CCDC190Q86UF4 302 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 PGAM4Q8N0Y7 254 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 OR4D6Q8NGJ1 314 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 OR9G1Q8NH87 305 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 C4orf3Q8WVX3 66 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 TRUB1Q8WWH5 349 aaKnown RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 LEAP2Q969E1 77 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 MOB3AQ96BX8 217 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 COQ2Q96H96 371 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CNN2Q99439 309 aaKnown RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 CHST5Q9GZS9 411 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 PLEKHA1Q9HB21 404 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 EXOSC4Q9NPD3 245 aaKnown RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 GLS2Q9UI32 602 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 MRM2Q9UI43 246 aaKnown RBP4.55□□□□□ -1.68
VPS33B-207ENST00000557470 SPATA2Q9UM82 520 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 GSTK1Q9Y2Q3 226 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 DMRT1Q9Y5R6 373 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 TMEM14AQ9Y6G1 99 aa4.55□□□□□ -1.68
VPS33B-207ENST00000557470 A0A087X0K7 114 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 LOC100506127A0A0U1RQW1 187 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 A0A0U1RRA0 63 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 PCP4L1A6NKN8 68 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ZNF729A6NN14 1252 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 J3QR06 171 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 CCRL2O00421 344 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 VCYO14598 125 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 PRYO14603 147 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 SH2D1BO14796 132 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 GATBO75879 557 aaKnown RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 SULT1C4O75897 302 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TNFAIP8O95379 198 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ELANEP08246 267 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 RRASP10301 218 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 CD1BP29016 333 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 FCGR2BP31994 310 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 HOXA1P49639 335 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 INSL3P51460 131 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 CFHR3Q02985 330 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 MADCAM1Q13477 382 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ATXN7L3Q14CW9 347 aaPredicted RBP4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ANKRD55Q3KP44 614 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 FAM27D1Q5T7N8 215 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 HES5Q5TA89 166 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 ASPHD1Q5U4P2 390 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TMEM236Q5W0B7 351 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 PRR27Q6MZM9 219 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 PQLC2Q6ZP29 291 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 UTS2BQ765I0 119 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TMEM179BQ7Z7N9 219 aa4.54□□□□□ -1.68
VPS33B-207ENST00000557470 TGIF2LXQ8IUE1 241 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms