RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 ADAM5Q6NVV9 412 aa10.65□□□□□ -0.7
SHMT2-229ENST00000557348 Q6ZPA2 131 aa10.65□□□□□ -0.7
SHMT2-229ENST00000557348 CYYR1Q96J86 154 aa10.65□□□□□ -0.7
SHMT2-229ENST00000557348 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
SHMT2-229ENST00000557348 TRGV8A0A0C4DH27 118 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 SLC31A2O15432 143 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 GPR137BO60478 399 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 ADAP1O75689 374 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 OR2C1O95371 312 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 ADH4P08319 380 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 WNT2P09544 360 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 SCTP09683 121 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 ZNF124Q15973 351 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 FBXL19-AS1Q494R0 122 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 PRR30Q53SZ7 412 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-229ENST00000557348 SOHLH1Q5JUK2 328 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 PRAMEF6Q5VXH4 476 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 DPPA3Q6W0C5 159 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 H1FOOQ8IZA3 346 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-229ENST00000557348 BEND2Q8NDZ0 799 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 LRRC29Q8WV35 223 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 ABHD14BQ96IU4 210 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 MEGF10Q96KG7 1140 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 NOL4LQ96MY1 436 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-229ENST00000557348 LIME1Q9H400 295 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 RAB9BQ9NP90 201 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 DCAF16Q9NXF7 216 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 SH3BGRL2Q9UJC5 107 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 FZR1Q9UM11 496 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 OR2W1Q9Y3N9 320 aa10.64□□□□□ -0.71
SHMT2-229ENST00000557348 A0A1W2PPH5 198 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OOEPA6NGQ2 149 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 MPPED1O15442 326 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 NDUFS6O75380 124 aaKnown RBP10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OR8U9P0C7N5 309 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 CAMLGP49069 296 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 TMEM33P57088 247 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 SPCS3P61009 180 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 TMEM187Q14656 261 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 HERPUD1Q15011 391 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 LIAT1Q6ZQX7 453 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 LILRB2Q8N423 598 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 FAM24BQ8N5W8 94 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OR11L1Q8NGX0 322 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OR8U1Q8NH10 309 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 EIF5A2Q9GZV4 153 aaKnown RBP10.63□□□□□ -0.71
SHMT2-229ENST00000557348 C19orf12Q9NSK7 152 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 FBXL17Q9UF56 701 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OR14J1Q9UGF5 321 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 A0A1W2PPE3 182 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 C9JQL5 133 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PPP1R2P9O14990 202 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 TNFRSF1AP19438 455 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 CHRNB4P30926 498 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PNRC1Q12796 327 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-229ENST00000557348 MSMO1Q15800 293 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 MIDNQ504T8 468 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PCSK4Q6UW60 755 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 SLC35E3Q7Z769 313 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PLPPR1Q8TBJ4 325 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 Q8TCH9 128 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 IL22RA2Q969J5 263 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 OR2V2Q96R30 315 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 SPIN2AQ99865 258 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 SPIN2BQ9BPZ2 258 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 NCOR1P1Q9H4R4 102 aa10.63□□□□□ -0.71
SHMT2-229ENST00000557348 PTPRQQ9UMZ3 2332 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 C3orf85A0A1B0GTC6 90 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 HSPA12AO43301 675 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 OR5AC1P0C628 307 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 RAB4AP20338 218 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 ZNF266Q14584 549 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 VHLLQ6RSH7 139 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 ZNF826PQ6ZT77 177 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
SHMT2-229ENST00000557348 RNASEH2CQ8TDP1 164 aaKnown RBP10.62□□□□□ -0.71
SHMT2-229ENST00000557348 GALMQ96C23 342 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 RBMXL1Q96E39 390 aaKnown RBP10.62□□□□□ -0.71
SHMT2-229ENST00000557348 OR10C1Q96KK4 312 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 LURAP1Q96LR2 239 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 MRPL37Q9BZE1 423 aaKnown RBP10.62□□□□□ -0.71
SHMT2-229ENST00000557348 TMEM222Q9H0R3 208 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 SVILO95425 2214 aa10.62□□□□□ -0.71
SHMT2-229ENST00000557348 ANKRD11Q6UB99 2663 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-229ENST00000557348 IGKV1-6A0A0C4DH72 117 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 RNF212BA8MTL3 300 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 PHF1O43189 567 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-229ENST00000557348 HBE1P02100 147 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 HSPB1P04792 205 aaKnown RBP10.61□□□□□ -0.71
SHMT2-229ENST00000557348 CD55P08174 381 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 GNRHRP30968 328 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 PRDX2P32119 198 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 TNFAIP6P98066 277 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-229ENST00000557348 TESK1Q15569 626 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 IAH1Q2TAA2 248 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-229ENST00000557348 PHLDA2Q53GA4 152 aa10.61□□□□□ -0.71
SHMT2-229ENST00000557348 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms