RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RITA1Q96K30 269 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 ZNF251Q9BRH9 671 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 Q9N2K0 584 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 HSF4Q9ULV5 492 aa13.04□□□□□ -0.32
VSX1-207ENST00000557285 IFITM5A6NNB3 132 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 LDLRAD4O15165 306 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 CD3GP09693 182 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 GNB3P16520 340 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 UBE2UQ5VVX9 321 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 CD200R1LQ6Q8B3 271 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 FAM131AQ6UXB0 335 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 MAFIPQ8WZ33 124 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 PHF21AQ96BD5 680 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 RAB3CQ96E17 227 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 ZNF107Q9UII5 783 aaPredicted RBP13.03□□□□□ -0.32
VSX1-207ENST00000557285 RNF150Q9ULK6 438 aa13.03□□□□□ -0.32
VSX1-207ENST00000557285 TRBV6-6A0A0A6YYG2 114 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 RAB29O14966 203 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.33
VSX1-207ENST00000557285 VDAC1P21796 283 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 ZBTB25P24278 435 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 RANBP1P43487 201 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 LY6G6FQ5SQ64 297 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.33
VSX1-207ENST00000557285 NR2C2APQ86WQ0 139 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 DUX3Q96PT4 197 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 C11orf54Q9H0W9 315 aaPredicted RBP13.02□□□□□ -0.33
VSX1-207ENST00000557285 PIPOXQ9P0Z9 390 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 MGAT4AQ9UM21 535 aa13.02□□□□□ -0.33
VSX1-207ENST00000557285 H7C2Y5 167 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 NBR2O15453 112 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 RRP9O43818 475 aaKnown RBP13.01□□□□□ -0.33
VSX1-207ENST00000557285 RPLP1P05386 114 aaKnown RBP13.01□□□□□ -0.33
VSX1-207ENST00000557285 GADD45AP24522 165 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 RAB25P57735 213 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 TEX38Q6PEX7 206 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 DRAXINQ8NBI3 349 aaPredicted RBP13.01□□□□□ -0.33
VSX1-207ENST00000557285 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 FCGR1BQ92637 280 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 ATG5Q9H1Y0 275 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
VSX1-207ENST00000557285 KCNK7Q9Y2U2 307 aa13.01□□□□□ -0.33
VSX1-207ENST00000557285 IGKV1-6A0A0C4DH72 117 aa13□□□□□ -0.33
VSX1-207ENST00000557285 TRDCB7Z8K6 153 aa13□□□□□ -0.33
VSX1-207ENST00000557285 BET1O15155 118 aa13□□□□□ -0.33
VSX1-207ENST00000557285 NEDD8Q15843 81 aa13□□□□□ -0.33
VSX1-207ENST00000557285 PNLIPRP3Q17RR3 467 aa13□□□□□ -0.33
VSX1-207ENST00000557285 CXorf66Q5JRM2 361 aaPredicted RBP13□□□□□ -0.33
VSX1-207ENST00000557285 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
VSX1-207ENST00000557285 ZNF773Q6PK81 442 aa13□□□□□ -0.33
VSX1-207ENST00000557285 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
VSX1-207ENST00000557285 COMMD1Q8N668 190 aa13□□□□□ -0.33
VSX1-207ENST00000557285 EDARADDQ8WWZ3 215 aa13□□□□□ -0.33
VSX1-207ENST00000557285 GON7Q9BXV9 100 aa13□□□□□ -0.33
VSX1-207ENST00000557285 OR51E2Q9H255 320 aa13□□□□□ -0.33
VSX1-207ENST00000557285 KIAA1456Q9P272 454 aa13□□□□□ -0.33
VSX1-207ENST00000557285 ZNF230Q9UIE0 474 aaPredicted RBP13□□□□□ -0.33
VSX1-207ENST00000557285 STUB1Q9UNE7 303 aa13□□□□□ -0.33
VSX1-207ENST00000557285 SSR3Q9UNL2 185 aa13□□□□□ -0.33
VSX1-207ENST00000557285 WSB1Q9Y6I7 421 aa13□□□□□ -0.33
VSX1-207ENST00000557285 LOC100506127A0A0U1RQW1 187 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 FABP7O15540 132 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 FCGR3AP08637 254 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 GSTP1P09211 210 aaKnown RBP12.99□□□□□ -0.33
VSX1-207ENST00000557285 CT45A6P0DMU7 189 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 CT45A5P0DMU8 189 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 CT45A7P0DMV0 189 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 GALP22466 123 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 ARFRP1Q13795 201 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 PLGLAQ15195 96 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 DEFB136Q30KP8 78 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 FAM71F2Q6NXP2 309 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 ZNF695Q8IW36 515 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 MRPL41Q8IXM3 137 aaKnown RBP12.99□□□□□ -0.33
VSX1-207ENST00000557285 WFDC9Q8NEX5 89 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 KCTD7Q96MP8 289 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 CHCHD6Q9BRQ6 235 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 YTHDF1Q9BYJ9 559 aaKnown RBP12.99□□□□□ -0.33
VSX1-207ENST00000557285 ZFP57Q9NU63 452 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 NECAP2Q9NVZ3 263 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 RDH8Q9NYR8 311 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 ZNF221Q9UK13 617 aa12.99□□□□□ -0.33
VSX1-207ENST00000557285 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 G3V318 75 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 ATP6V0E1O15342 81 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 GSTT2P0CG29 244 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 GSTT2BP0CG30 244 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 HIST1H1DP16402 221 aaKnown RBP12.98□□□□□ -0.33
VSX1-207ENST00000557285 RAB6AP20340 208 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 TALDO1P37837 337 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 THBS3P49746 956 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 LINC00205P59089 165 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 MXD1Q05195 221 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 C5orf64Q2M2E5 130 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 IGSF11Q5DX21 431 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 LINC00482Q8N8I6 264 aa12.98□□□□□ -0.33
VSX1-207ENST00000557285 MRAPQ8TCY5 172 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms