RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MDFICQ9P1T7 246 aa3.46□□□□□ -1.86
SCFD1-223ENST00000557076 PEMTQ9UBM1 199 aa3.46□□□□□ -1.86
SCFD1-223ENST00000557076 PEF1Q9UBV8 284 aaKnown RBP3.46□□□□□ -1.86
SCFD1-223ENST00000557076 KIF25Q9UIL4 384 aa3.46□□□□□ -1.86
SCFD1-223ENST00000557076 LAMP5Q9UJQ1 280 aa3.46□□□□□ -1.86
SCFD1-223ENST00000557076 HSF4Q9ULV5 492 aa3.46□□□□□ -1.86
SCFD1-223ENST00000557076 FLG2Q5D862 2391 aaPredicted RBP3.46□□□□□ -1.86
SCFD1-223ENST00000557076 C16orf90A8MZG2 172 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 C11orf94C9JXX5 98 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 LOC110117498-PIK3R3F6TDL0 507 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 C15orf65H3BRN8 121 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 FCN1O00602 326 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 RRHO14718 337 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 MRASO14807 208 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 NBR2O15453 112 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SELENOFO60613 162 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SRSF10O75494 262 aaKnown RBP3.45□□□□□ -1.86
SCFD1-223ENST00000557076 KDM4BO94953 1096 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 NDUFA3O95167 84 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ZNF44P15621 663 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 AADACP22760 399 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 GLP1RP43220 463 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ALDH3A2P51648 485 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 RIDAP52758 137 aaKnown RBP3.45□□□□□ -1.86
SCFD1-223ENST00000557076 HCCSP53701 268 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 MFAP2P55001 183 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SNU13P55769 128 aaKnown RBP3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ACTR3P61158 418 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 LIPEQ05469 1076 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ATXN7L3Q14CW9 347 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-223ENST00000557076 CDK5R1Q15078 307 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 GUCA2BQ16661 112 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 LTC4SQ16873 150 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ECSCRQ19T08 205 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 LRRC36Q1X8D7 754 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 ANKRD55Q3KP44 614 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 RSBN1Q5VWQ0 802 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-223ENST00000557076 UNQ5815/PRO19632Q6UWF5 114 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 GSG1LQ6UXU4 331 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 PPP1R27Q86WC6 154 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SAXO1Q8IYX7 474 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SNAPC3Q92966 411 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 BORCS8Q96FH0 119 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 USMG5Q96IX5 58 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 RDH12Q96NR8 316 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 CHST5Q9GZS9 411 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 IL1RAPQ9NPH3 570 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 FAM118AQ9NWS6 357 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 OR52A1Q9UKL2 312 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 KLHDC2Q9Y2U9 406 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 SNX5Q9Y5X3 404 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM14AQ9Y6G1 99 aa3.45□□□□□ -1.86
SCFD1-223ENST00000557076 AGRNO00468 2067 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 TRAV24A0A0B4J272 114 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 IGKV1-9A0A0C4DH69 117 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 IGKV1-12A0A0C4DH73 117 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM272A0A1B0GTI8 110 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 LGALS9O00182 355 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 NDUFAB1O14561 156 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 ORC5O43913 435 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 IGKV1D-12P01611 117 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 SEMG1P04279 462 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 INAFM2P0DMQ5 153 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 FOLR2P14207 255 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 PRKACBP22694 351 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 CALRP27797 417 aaKnown RBP3.44□□□□□ -1.86
SCFD1-223ENST00000557076 RRM2P31350 389 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 SSTR5P35346 364 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 VSNL1P62760 191 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 NDPQ00604 133 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 RPEL1Q2QD12 228 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 DEFB135Q30KP9 77 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 CT45A1Q5HYN5 189 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 SOHLH1Q5JUK2 328 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 SLC35D3Q5M8T2 416 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 BCL2L15Q5TBC7 163 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 Q6ZR54 194 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 ARPINQ7Z6K5 226 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 NR2C2APQ86WQ0 139 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 LFNGQ8NES3 379 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 OR52L2PQ8NGH6 319 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 CT45A3Q8NHU0 189 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 CNIH3Q8TBE1 160 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 PP6455Q8WZ26 134 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 ANP32BQ92688 251 aaKnown RBP3.44□□□□□ -1.86
SCFD1-223ENST00000557076 ARL11Q969Q4 196 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 FAM162AQ96A26 154 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 OTULINQ96BN8 352 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 PYURFQ96I23 114 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM68Q96MH6 324 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 RNF5Q99942 180 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 HOPXQ9BPY8 73 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-223ENST00000557076 BTBD10Q9BSF8 475 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 MOB1AQ9H8S9 216 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
SCFD1-223ENST00000557076 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 SAMD4AQ9UPU9 718 aaKnown RBP3.44□□□□□ -1.86
SCFD1-223ENST00000557076 R4GMQ9 66 aa3.44□□□□□ -1.86
SCFD1-223ENST00000557076 TRAV39A0A0B4J263 110 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms