RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HSPA12AO43301 675 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 PGLYRP1O75594 196 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 RP2O75695 350 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 MPC2O95563 127 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LHBP01229 141 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 HEXAP06865 529 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 HOXB5P09067 269 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 RCC1P18754 421 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 GNRHRP30968 328 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 IL2RGP31785 369 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 CEACAM6P40199 344 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LUMP51884 338 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 FXYD4P59646 89 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 EIF5AP63241 154 aaKnown RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 PAX5Q02548 391 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 SRSF1Q07955 248 aaKnown RBP eCLIP3.71□□□□□ -1.82
SRP54-212ENST00000556992 IL15RAQ13261 267 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ZNF345Q14585 488 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TMEM187Q14656 261 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 SMCO1Q147U7 214 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 IAH1Q2TAA2 248 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 C6orf183Q5T699 404 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 PRSS54Q6PEW0 395 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ACP7Q6ZNF0 438 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LRP11Q86VZ4 500 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 H1FOOQ8IZA3 346 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 SLC7A5P1Q8MH63 180 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 BATF2Q8N1L9 274 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 KCNRGQ8N5I3 272 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ZBTB34Q8NCN2 500 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ST6GALNAC3Q8NDV1 305 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 OR5D13Q8NGL4 314 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 OR11L1Q8NGX0 322 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LILRB4Q8NHJ6 448 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LRRC29Q8WV35 223 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 IL22RA2Q969J5 263 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 MRPL24Q96A35 216 aaKnown RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 GALMQ96C23 342 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 C18orf12Q96KH6 178 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 LURAP1Q96LR2 239 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TMEM56Q96MV1 263 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 CABLES2Q9BTV7 478 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 RNF126Q9BV68 326 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 EGLN1Q9GZT9 426 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ARL6Q9H0F7 186 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TMEM222Q9H0R3 208 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ESRP2Q9H6T0 727 aaKnown RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 TAF9BQ9HBM6 251 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 RAB9BQ9NP90 201 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 SLC2A9Q9NRM0 540 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 UFSP2Q9NUQ7 469 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 IL36RNQ9UBH0 155 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 OR14J1Q9UGF5 321 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 IL19Q9UHD0 177 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ERRFI1Q9UJM3 462 aaPredicted RBP3.71□□□□□ -1.82
SRP54-212ENST00000556992 FZR1Q9UM11 496 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TNFSF18Q9UNG2 199 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TMED3Q9Y3Q3 217 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 TMEM56-RWDD3S4R434 201 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 ITPR3Q14573 2671 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 APC2O95996 2303 aa3.71□□□□□ -1.82
SRP54-212ENST00000556992 BOD1L1Q8NFC6 3051 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 TRAV14DV4A0A0A6YYC5 116 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 IGKV1-6A0A0C4DH72 117 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 IGHV3-64DA0A0J9YX35 117 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 A0A1B0GW55 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUXBA0A1W2PPF3 345 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 KANTRA0A1W2PQU2 76 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OOEPA6NGQ2 149 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ZSCAN5BA6NJL1 495 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 AP4M1O00189 453 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CCL21O00585 134 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CCSO14618 274 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 WNT9BO14905 357 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 PHF1O43189 567 aaPredicted RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 SPINT2O43291 252 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SPRY3O43610 288 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ADAP1O75689 374 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ATG12O94817 140 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CDS2O95674 445 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 SERPINE2P07093 398 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 WNT2P09544 360 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR4A8P0C604 315 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 OR5AC1P0C628 307 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L2P0CJ85 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L3P0CJ86 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L4P0CJ87 422 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L5P0CJ88 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L6P0CJ89 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 DUX4L7P0CJ90 424 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 LYL1P12980 280 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 IRF2P14316 349 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CHRNB4P30926 498 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 HTR2BP41595 481 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 CA7P43166 264 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 ASCL1P50553 236 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 AP2S1P53680 142 aaPredicted RBP3.7□□□□□ -1.82
SRP54-212ENST00000556992 HLA-DRB3P79483 266 aa3.7□□□□□ -1.82
SRP54-212ENST00000556992 TNFAIP6P98066 277 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms