RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RABL2AQ9UBK7 228 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-244ENST00000556898 RPUSD1Q9UJJ7 312 aaKnown RBP4.33□□□□□ -1.72
ATXN3-244ENST00000556898 RNF150Q9ULK6 438 aa4.33□□□□□ -1.72
ATXN3-244ENST00000556898 RABL2BQ9UNT1 228 aa4.33□□□□□ -1.72
ATXN3-244ENST00000556898 FLVCR2Q9UPI3 526 aa4.33□□□□□ -1.72
ATXN3-244ENST00000556898 SONP18583 2426 aaKnown RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 TRAV6A0A075B6T7 132 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV3OR16-10A0A075B7F0 116 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 TRGV10A0A0A0MS01 117 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 TRBV6-7A0A0A0MS04 114 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 IGKV1D-13A0A0B4J2D9 117 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 hADV38S2A0JD32 116 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF729A6NN14 1252 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 C17orf98A8MV24 154 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 NPIPB11E5RHQ5 1161 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 H3BUI4 141 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 LYRM1O43325 122 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 KCNAB3O43448 404 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 OR5H8P0DN80 308 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 IGKV1-13P0DP09 117 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SLC25A16P16260 332 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SRD5A1P18405 259 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 USF1P22415 310 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 COX7A1P24310 79 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 PAX6P26367 422 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 PPP1CCP36873 323 aaKnown RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 OR3A3P47888 321 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 GNG10P50151 68 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 NPY4RP50391 375 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF134P52741 427 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 LOXL3P58215 753 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 DSCR9P59020 149 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 FXYD4P59646 89 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ACTBP60709 375 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ACTG1P63261 375 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 PAX5Q02548 391 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SSBP1Q04837 148 aaKnown RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 LOXL1Q08397 574 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 BAMBIQ13145 260 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 KLRD1Q13241 179 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ASAH1Q13510 395 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 DYRK1AQ13627 763 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 TMEM249Q2WGJ8 235 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SCGB2B2Q4G0G5 96 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ESCO2Q56NI9 601 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 RNASE10Q5GAN6 216 aaKnown RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 CT83Q5H943 113 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 C6orf183Q5T699 404 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 AADACL3Q5VUY0 350 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF660Q6AZW8 331 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 Q6ZS49 121 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 OVCH2Q7RTZ1 564 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 NRARPQ7Z6K4 114 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZFAND2BQ8WV99 257 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 CORO2AQ92828 525 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 C5orf30Q96GV9 206 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF714Q96N38 554 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 GPHA2Q96T91 129 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF2Q9BSG1 426 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 CABLES2Q9BTV7 478 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 RIMS4Q9H426 269 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SIRT7Q9NRC8 400 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 CCL28Q9NRJ3 127 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 RDH8Q9NYR8 311 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 KCNIP1Q9NZI2 227 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF69Q9UC07 566 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SLC23A1Q9UHI7 598 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 VSIG4Q9Y279 399 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 UBE2J1Q9Y385 318 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 SOX21Q9Y651 276 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-244ENST00000556898 MXRA5Q9NR99 2828 aa4.32□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV2-70DA0A0C4DH43 119 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 KIR2DS1A0A191URI9 304 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 KBTBD11-OT1A0A1B0GTJ5 212 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 A0A1B0GVG6 124 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 FUOMA2VDF0 154 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 A8MXK9 166 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 DISC1C4P0D8 188 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 F2RL2O00254 374 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 HSD17B6O14756 317 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 ARPC1BO15143 372 aaKnown RBP4.31□□□□□ -1.72
ATXN3-244ENST00000556898 FOXH1O75593 365 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 LY86O95711 162 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 ECDO95905 644 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-244ENST00000556898 OR8U9P0C7N5 309 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF728P0DKX0 622 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV1-8P0DP01 117 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV4-31P0DP07 118 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 VSIG10L2P0DP72 767 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 GZMHP20718 246 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 CEACAM6P40199 344 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 KIR2DS4P43632 304 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 DVL1P1P54792 670 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-244ENST00000556898 RAB25P57735 213 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 LINC00205P59089 165 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 TAS2R46P59540 309 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 TSPAN5P62079 268 aa4.31□□□□□ -1.72
ATXN3-244ENST00000556898 SRSF2Q01130 221 aaKnown RBP4.31□□□□□ -1.72
ATXN3-244ENST00000556898 MEF2CQ06413 473 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms