RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 Q9H521 79 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 MBNL3Q9NUK0 354 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 LIN7CQ9NUP9 197 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 HSPA12AO43301 675 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 YPEL1O60688 119 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 IGHG2P01859 326 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 OR5H8P0DN80 308 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 CRHBPP24387 322 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 CALRP27797 417 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 SOX6P35712 828 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF137PP52743 207 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 RAB11BQ15907 218 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 CT45A1Q5HYN5 189 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 OR10K2Q6IF99 312 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 MOB1BQ7L9L4 216 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 OR2W3Q7Z3T1 314 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 C6orf201Q7Z4U5 140 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 LRRTM1Q86UE6 522 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 LYPD6Q86Y78 171 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 WFDC9Q8NEX5 89 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 CT45A3Q8NHU0 189 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 DPF1Q92782 380 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ST6GALNAC6Q969X2 333 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 YPEL2Q96QA6 119 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 S1PR3Q99500 378 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ABCG5Q9H222 651 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM140Q9NV12 185 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 PIPOXQ9P0Z9 390 aa5.81□□□□□ -1.48
SCFD1-222ENST00000556768 ZMAT5Q9UDW3 170 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 LSM2Q9Y333 95 aaKnown RBP5.81□□□□□ -1.48
SCFD1-222ENST00000556768 KIAA2026Q5HYC2 2103 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 PRSS29PA6NIE9 313 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 SLC17A2O00624 439 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 PDCD5O14737 125 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 RAB29O14966 203 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 LANCL1O43813 399 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 H2AFB1P0C5Y9 115 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 H2AFB2P0C5Z0 115 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 VDAC1P21796 283 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 ZBTB25P24278 435 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 CHATP28329 748 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF134P52741 427 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 RAB32Q13637 225 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 IRF3Q14653 427 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 MMDQ15546 238 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 PNLIPRP3Q17RR3 467 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 SIGIRRQ6IA17 410 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 STPG2Q8N412 459 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 STPG3Q8N7X2 389 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 OR52L2PQ8NGH6 319 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 OR56B1Q8NGI3 324 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 MRPL30Q8TCC3 161 aaKnown RBP5.8□□□□□ -1.48
SCFD1-222ENST00000556768 NOL4LQ96MY1 436 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-222ENST00000556768 SULT4A1Q9BR01 284 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF251Q9BRH9 671 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 CENPOQ9BU64 300 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 TM2D1Q9BX74 207 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 NECAP2Q9NVZ3 263 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 KIAA1456Q9P272 454 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 RAB26Q9ULW5 256 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 PLA2G2DQ9UNK4 145 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 AK6Q9Y3D8 172 aaKnown RBP5.8□□□□□ -1.48
SCFD1-222ENST00000556768 V9GY05 133 aa5.8□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM14DPA8MWL7 114 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 MYL9P24844 172 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 PPP1CCP36873 323 aaKnown RBP5.79□□□□□ -1.48
SCFD1-222ENST00000556768 P2RY14Q15391 338 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 BEAN1Q3B7T3 259 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 TCTEX1D4Q5JR98 221 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 CXorf66Q5JRM2 361 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-222ENST00000556768 LY6G6FQ5SQ64 297 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM65Q6PI78 240 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF367Q7RTV3 350 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF439Q8NDP4 499 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 PHF21AQ96BD5 680 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 CHCHD6Q9BRQ6 235 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 MCRIP2Q9BUT9 160 aaKnown RBP5.79□□□□□ -1.48
SCFD1-222ENST00000556768 C12orf4Q9NQ89 552 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 LINC00527Q9UJ94 153 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 HSF4Q9ULV5 492 aa5.79□□□□□ -1.48
SCFD1-222ENST00000556768 METTL21EPA6NDL7 271 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 SLC31A2O15432 143 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 DENRO43583 198 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 MRPS14O60783 128 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 GADD45AP24522 165 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 MC5RP33032 325 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 CEACAM6P40199 344 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 GPR12P47775 334 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 VEGFCP49767 419 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 GP2P55259 537 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 RPS25P62851 125 aaKnown RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 UNC119Q13432 240 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 PLGLAQ15195 96 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 TBCEQ15813 527 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 C2orf76Q3KRA6 126 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 KPRPQ5T749 579 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-222ENST00000556768 TMEM91Q6ZNR0 172 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 ZNF695Q8IW36 515 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 FAM3DQ96BQ1 224 aa5.78□□□□□ -1.48
SCFD1-222ENST00000556768 CMSS1Q9BQ75 279 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms