RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 C14orf144Q96I85 54 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CYYR1Q96J86 154 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 OR4K3Q96R72 315 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 HBEGFQ99075 208 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 PKMYT1Q99640 499 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 GPR22Q99680 433 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CMSS1Q9BQ75 279 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SULT4A1Q9BR01 284 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 UTP23Q9BRU9 249 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 EMC6Q9BV81 110 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 SEC11CQ9BY50 192 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 PLA2G2FQ9BZM2 168 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ARL6Q9H0F7 186 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RAB1BQ9H0U4 201 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 METTL17Q9H7H0 456 aaPredicted RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 RNF122Q9H9V4 155 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TREM1Q9NP99 234 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF302Q9NR11 478 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 COMMD9Q9P000 198 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 ZNRD1Q9P1U0 126 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 COMMD3Q9UBI1 195 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 GNG8Q9UK08 70 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 NDRG2Q9UN36 371 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 CARHSP1Q9Y2V2 147 aaKnown RBP2.82□□□□□ -1.96
PRPF39-210ENST00000556718 FIS1Q9Y3D6 152 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 UBIAD1Q9Y5Z9 338 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM14AQ9Y6G1 99 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 V9GYS6 101 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 PXDNQ92626 1479 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 USP54Q70EL1 1684 aa2.82□□□□□ -1.96
PRPF39-210ENST00000556718 TDRD6O60522 2096 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 IGHV1OR15-9A0A0B4J2B8 117 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 A0A1B0GVX0 72 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 LRRN3E7EW58 273 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MKRN2OSH3BPM6 223 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 TOX3O15405 576 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR2T1O43869 369 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ALOX12BO75342 701 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 IL5P05113 134 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 TLX1NBP0CAT3 122 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 GABRA1P14867 456 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF25P17030 456 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 IGFBP3P17936 291 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 PRPS1L1P21108 318 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 FGF7P21781 194 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 PPIBP23284 216 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MIPP30301 263 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 FAUP35544 74 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 PPOXP50336 477 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR4D2P58180 307 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 RPL31P62899 125 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 SLC35A1P78382 337 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 CRADDP78560 199 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MRPS10P82664 201 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 CYP24A1Q07973 514 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MLLT11Q13015 90 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 GPR176Q14439 515 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR1Q1Q15612 314 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 TRAM1Q15629 374 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 NDUFAF6Q330K2 333 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MPV17L2Q567V2 206 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 AKR1C8PQ5T2L2 129 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 LAIR2Q6ISS4 152 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MED27Q6P2C8 311 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 SPNS3Q6ZMD2 512 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MDP1Q86V88 176 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 LRRC28Q86X40 367 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ANGPTL5Q86XS5 388 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 GID4Q8IVV7 300 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 DAW1Q8N136 415 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 SYS1Q8N2H4 156 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ACBD4Q8NC06 268 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 TMEM161BQ8NDZ6 487 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR2D3Q8NGH3 330 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR13D1Q8NGV5 346 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR10J5Q8NHC4 309 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 RXFP4Q8TDU9 374 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 FLYWCH2Q96CP2 140 aaKnown RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MALSU1Q96EH3 234 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 SMARCD1Q96GM5 515 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ACBD6Q9BR61 282 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ZNF2Q9BSG1 426 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 ULBP2Q9BZM5 246 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 OR51B6Q9H340 312 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 CSNK1G1Q9HCP0 422 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 C1orf109Q9NX04 203 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 NDUFB11Q9NX14 153 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MS4A12Q9NXJ0 267 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 FBXL3Q9UKT7 428 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 TBX21Q9UL17 535 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 COL1A1P02452 1464 aaPredicted RBP2.81□□□□□ -1.96
PRPF39-210ENST00000556718 C3P01024 1663 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MON2Q7Z3U7 1717 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 NALCNQ8IZF0 1738 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 FMN2Q9NZ56 1722 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 KDM3BQ7LBC6 1761 aa2.81□□□□□ -1.96
PRPF39-210ENST00000556718 MTCL1Q9Y4B5 1905 aaKnown RBP2.8□□□□□ -1.96
PRPF39-210ENST00000556718 RIMBP3Q9UFD9 1639 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 DIP2CQ9Y2E4 1556 aa2.8□□□□□ -1.96
PRPF39-210ENST00000556718 TNS3Q68CZ2 1445 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms