RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 LRRC75AQ8NAA5 344 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 OR4P4Q8NGL7 312 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 FAM222BQ8WU58 562 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 FAM131CQ96AQ9 280 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 RHOFQ9HBH0 211 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 SLC25A17O43808 307 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 GZMKP49863 264 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 BMPERQ8N8U9 685 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 OR10Z1Q8NGY1 313 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 ACP7Q6ZNF0 438 aa14.8□□□□□ -0.04
PTPN21-208ENST00000556564 PSG7Q13046 419 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 TGFAP01135 160 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 CENPVQ7Z7K6 275 aaPredicted RBP14.79□□□□□ -0.04
PTPN21-208ENST00000556564 AQP3Q92482 292 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 MARVELD1Q9BSK0 173 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 C1QTNF9BB2RNN3 333 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 C1QTNF9P0C862 333 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 RAG2P55895 527 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 FAM78BQ5VT40 261 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 ZNF66Q6ZN08 573 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 ZCCHC24Q8N2G6 241 aaKnown RBP14.79□□□□□ -0.04
PTPN21-208ENST00000556564 WDR61Q9GZS3 305 aaKnown RBP14.79□□□□□ -0.04
PTPN21-208ENST00000556564 ATPIF1Q9UII2 106 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 OR9G1Q8NH87 305 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 CTDSP1Q9GZU7 261 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 RCC2Q9P258 522 aaKnown RBP14.79□□□□□ -0.04
PTPN21-208ENST00000556564 hCG_38984A0A1B0GV85 526 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 PIN1P1O15428 100 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 GNG4P50150 75 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 FAM216BQ8N7L0 139 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 CBLN4Q9NTU7 201 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 PITPNC1Q9UKF7 332 aa14.79□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A10PA6NDY2 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A18PA6NE21 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A16PA6NEW6 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A20PA6NIJ5 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A8PA6NJQ4 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A7PA6NKC0 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A22PA8MWA6 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A12PA8MX19 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A5PA8MXJ8 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A23PA8MXZ1 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 J3QW42 95 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A15PP0C7V4 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A13PP0C7W8 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A14PP0C7W9 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM90A24PP0C7X0 464 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 PTGDSP41222 190 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 PSG5Q15238 335 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 FAM103A1Q9BTL3 118 aaKnown RBP14.78□□□□□ -0.04
PTPN21-208ENST00000556564 C20orf202A1L168 122 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 ZNF729A6NN14 1252 aaPredicted RBP14.78□□□□□ -0.04
PTPN21-208ENST00000556564 ZNF680Q8NEM1 530 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 PAX5Q02548 391 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 TECRQ9NZ01 308 aaKnown RBP14.78□□□□□ -0.04
PTPN21-208ENST00000556564 PRB3Q04118 309 aaPredicted RBP14.78□□□□□ -0.04
PTPN21-208ENST00000556564 Q96M66 194 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 REG1AP05451 166 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 WNT5AP41221 380 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 TMEM255AQ5JRV8 349 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 RNF2Q99496 336 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 GHITMQ9H3K2 345 aa14.78□□□□□ -0.04
PTPN21-208ENST00000556564 IGLV3-32A0A0A0MS00 114 aa14.77□□□□□ -0.04
PTPN21-208ENST00000556564 MRPL37Q9BZE1 423 aaKnown RBP14.77□□□□□ -0.04
PTPN21-208ENST00000556564 C17orf100A8MU93 164 aa14.77□□□□□ -0.04
PTPN21-208ENST00000556564 LYNX1G3V0Z9 82 aa14.77□□□□□ -0.04
PTPN21-208ENST00000556564 LYNX1P0DP58 116 aa14.77□□□□□ -0.04
PTPN21-208ENST00000556564 MUC1P15941 1255 aaPredicted RBP14.77□□□□□ -0.04
PTPN21-208ENST00000556564 IGHV1-18A0A0C4DH31 117 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 C1QTNF5Q9BXJ0 243 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 LOC390937A0A1W2PQ73 354 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 SPINK4O60575 86 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 C1orf100Q5SVJ3 147 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 EWSR1Q01844 656 aaKnown RBP eCLIP14.77□□□□□ -0.05
PTPN21-208ENST00000556564 SLC24A4Q8NFF2 622 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 C7orf69Q9H7B7 122 aa14.77□□□□□ -0.05
PTPN21-208ENST00000556564 ZNF79Q15937 498 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 ZNF429Q86V71 674 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 VKORC1L1Q8N0U8 176 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 JPT1Q9UK76 154 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 RPL8P62917 257 aaKnown RBP14.76□□□□□ -0.05
PTPN21-208ENST00000556564 GUK1Q16774 197 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 SFTA3P0C7M3 94 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 NTF3P20783 257 aa14.76□□□□□ -0.05
PTPN21-208ENST00000556564 RBPMS2Q6ZRY4 209 aaKnown RBP14.76□□□□□ -0.05
PTPN21-208ENST00000556564 PGLYRP1O75594 196 aaPredicted RBP14.76□□□□□ -0.05
PTPN21-208ENST00000556564 RAB19A4D1S5 217 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 G3V3Q6 166 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 MMP24Q9Y5R2 645 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 A0A1W2PPQ1 181 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 HLA-GP17693 338 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 ID1P41134 155 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 TEX261Q6UWH6 196 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 U3KQ87 197 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 CLPSP04118 112 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 TEPPQ6URK8 271 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 H0Y980 276 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 RNASEK-C17orf49H0YIS7 233 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 HPXP02790 462 aa14.75□□□□□ -0.05
PTPN21-208ENST00000556564 FABP9Q0Z7S8 132 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms