RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 TMEM89A2RUT3 159 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 TXNL1O43396 289 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 SNRNP70P08621 437 aaKnown RBP16.21■□□□□ 0.19
RCCD1-205ENST00000556333 FAM106CPP0CH98 169 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 SAA2P0DJI9 122 aaPredicted RBP16.21■□□□□ 0.19
RCCD1-205ENST00000556333 PRSS3P35030 304 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 ZNF137PP52743 207 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 RAG2P55895 527 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 FOXL1Q12952 345 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 SNX29P2Q8IUI4 249 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 ODF3L1Q8IXM7 274 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 ABHD14BQ96IU4 210 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 RBM38Q9H0Z9 239 aaKnown RBP16.21■□□□□ 0.19
RCCD1-205ENST00000556333 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 ANXA10Q9UJ72 324 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 RNF150Q9ULK6 438 aa16.21■□□□□ 0.19
RCCD1-205ENST00000556333 CTDSP2O14595 271 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 ITGB1BP1O14713 200 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 RAB29O14966 203 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 LANCL1O43813 399 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 CHST1O43916 411 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 CTXN2P0C2S0 81 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 OR3A3P47888 321 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 CNIH2Q6PI25 160 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 C12orf54Q6X4T0 127 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 HOGA1Q86XE5 327 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 CFHR4Q92496 578 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 S1PR3Q99500 378 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 SLC25A33Q9BSK2 321 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 DCUN1D5Q9BTE7 237 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
RCCD1-205ENST00000556333 DIRAS3O95661 229 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 IGKV1D-33P01593 117 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 IGKV1-33P01594 117 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 GPR12P47775 334 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 RELBQ01201 579 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 LAX1Q8IWV1 398 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 OR4F5Q8NH21 305 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 AKR1E2Q96JD6 320 aa16.19■□□□□ 0.18
RCCD1-205ENST00000556333 J3QRK9 145 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 HLA-DQB1P01920 261 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 OR8U9P0C7N5 309 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 TMEM11P17152 192 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 MDKP21741 143 aaPredicted RBP16.18■□□□□ 0.18
RCCD1-205ENST00000556333 HNF4GQ14541 408 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 AWAT1Q58HT5 328 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 RPL39P5Q59GN2 51 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 Q6ZSV7 163 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 ZNF833PQ6ZTB9 187 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 THNSL2Q86YJ6 484 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 OR8U1Q8NH10 309 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 MCFD2Q8NI22 146 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 MRPL20Q9BYC9 149 aaKnown RBP16.18■□□□□ 0.18
RCCD1-205ENST00000556333 NPFFR1Q9GZQ6 430 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 OR2D2Q9H210 308 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 MIXL1Q9H2W2 232 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 GHITMQ9H3K2 345 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 BEX1Q9HBH7 125 aa16.18■□□□□ 0.18
RCCD1-205ENST00000556333 FAM90A9PA6NNJ1 464 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 ZNF701M0R085 212 aaPredicted RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 NDUFA7O95182 113 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 NFYAP23511 347 aaPredicted RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 FBLN7Q53RD9 439 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 ARSJQ5FYB0 599 aaPredicted RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 RNASE12Q5GAN4 147 aaKnown RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 C16orf82Q7Z2V1 217 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 H1FOOQ8IZA3 346 aaPredicted RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 OR4C13Q8NGP0 309 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 RBM14Q96PK6 669 aaKnown RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 AGMATQ9BSE5 352 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 SLIRPQ9GZT3 109 aaKnown RBP16.17■□□□□ 0.18
RCCD1-205ENST00000556333 TOLLIPQ9H0E2 274 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 NECAP2Q9NVZ3 263 aa16.17■□□□□ 0.18
RCCD1-205ENST00000556333 OR2F2O95006 317 aa16.16■□□□□ 0.18
RCCD1-205ENST00000556333 CD1BP29016 333 aa16.16■□□□□ 0.18
RCCD1-205ENST00000556333 FAM71F2Q6NXP2 309 aa16.16■□□□□ 0.18
RCCD1-205ENST00000556333 DIRAS2Q96HU8 199 aa16.16■□□□□ 0.18
RCCD1-205ENST00000556333 ZNF736B4DX44 427 aaPredicted RBP16.15■□□□□ 0.18
RCCD1-205ENST00000556333 LSAMPQ13449 338 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 HABP2Q14520 560 aaPredicted RBP16.15■□□□□ 0.18
RCCD1-205ENST00000556333 OR5AP2Q8NGF4 316 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 OR2T10Q8NGZ9 312 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 SNAPC3Q92966 411 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 NABP2Q9BQ15 211 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 SCPEP1Q9HB40 452 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 NDUFA13Q9P0J0 144 aa16.15■□□□□ 0.18
RCCD1-205ENST00000556333 DPPA5A6NC42 116 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 TSPAN9O75954 239 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 MOSP00540 346 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 LUMP51884 338 aaPredicted RBP16.14■□□□□ 0.17
RCCD1-205ENST00000556333 CDK10Q15131 360 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 GLDNQ6ZMI3 551 aaPredicted RBP16.14■□□□□ 0.17
RCCD1-205ENST00000556333 C3orf56Q8N813 242 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 GPX8Q8TED1 209 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 C15orf40Q8WUR7 153 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 RBMXL1Q96E39 390 aaKnown RBP16.14■□□□□ 0.17
RCCD1-205ENST00000556333 EAF1Q96JC9 268 aaPredicted RBP16.14■□□□□ 0.17
RCCD1-205ENST00000556333 ZNF251Q9BRH9 671 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 PRSS22Q9GZN4 317 aa16.14■□□□□ 0.17
RCCD1-205ENST00000556333 RANBP3Q9H6Z4 567 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms