RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 SOX14O95416 240 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 HSPB1P04792 205 aaKnown RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 HMGN1P05114 100 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CLEC3BP05452 202 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CALCBP10092 127 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 BCL3P20749 454 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 DCKP27707 260 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 HTR1FP30939 366 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CAPGP40121 348 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 RBP2P50120 134 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 TMBIM6P55061 237 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 F2RL1P55085 397 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 SCN1BQ07699 218 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 ATP6AP1Q15904 470 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 RBM48Q5RL73 367 aaKnown RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 BCL2L15Q5TBC7 163 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 TTC23Q5W5X9 447 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 LINC00322Q6ZN03 302 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 DHRSXQ8N5I4 330 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 RPP25LQ8N5L8 163 aaKnown RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 AQP11Q8NBQ7 271 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 MINDY2Q8NBR6 621 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CHST4Q8NCG5 386 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CCDC54Q8NEL0 328 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 TEX47Q8TBZ9 253 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 SNAPC3Q92966 411 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 LEAP2Q969E1 77 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 BORCS5Q969J3 196 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 COQ2Q96H96 371 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 NABP2Q9BQ15 211 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 HSPB9Q9BQS6 159 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 DGCR6LQ9BY27 220 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 BARHL1Q9BZE3 327 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 MOB1AQ9H8S9 216 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 PLEKHA1Q9HB21 404 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 RHOFQ9HBH0 211 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 SMPD3Q9NY59 655 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF107Q9UII5 783 aaPredicted RBP3.67□□□□□ -1.82
ATXN3-239ENST00000556315 OR52A1Q9UKL2 312 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 IKZF2Q9UKS7 526 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 BLOC1S6Q9UL45 172 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 ERGIC3Q9Y282 383 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 GSTK1Q9Y2Q3 226 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 PAM16Q9Y3D7 125 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 SNX5Q9Y5X3 404 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 WSB1Q9Y6I7 421 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 R4GMQ9 66 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 A3GALT2U3KPV4 340 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 V9GYQ6 96 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 SORL1Q92673 2214 aa3.67□□□□□ -1.82
ATXN3-239ENST00000556315 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 A0A087WW49 117 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 MEIKINA0A087WXM9 373 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 TRAV41A0A0B4J266 112 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 A0A1W2PPE3 182 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 NUPR2A6NF83 97 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 G3V318 75 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 H3BN98 237 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 SLC33A1O00400 549 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 SYT7O43581 403 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 SRSF10O75494 262 aaKnown RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 RGS11O94810 467 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 NDUFB4O95168 129 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 CNIH1O95406 144 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 LGALS1P09382 135 aaKnown RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF44P15621 663 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 EDN2P20800 178 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 CCL1P22362 96 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 PRKACBP22694 351 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 IL3RAP26951 378 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 REG1BP48304 166 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 GNG10P50151 68 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 SNU13P55769 128 aaKnown RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 MTCP1P56278 107 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 GABARAPL2P60520 117 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 RAB40BQ12829 278 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 PDZK1IP1Q13113 114 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 TBCEQ15813 527 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 LTC4SQ16873 150 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 MICAQ29983 383 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 Q6P435 159 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF322Q6U7Q0 402 aaPredicted RBP3.66□□□□□ -1.82
ATXN3-239ENST00000556315 ZNF554Q86TJ5 538 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 PARP16Q8N5Y8 322 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 LINC00311Q8N616 119 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 IQCF1Q8N6M8 205 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 YIPF7Q8N8F6 280 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 C8orf31Q8N9H6 132 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 TMEM104Q8NE00 496 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 OR51T1Q8NGJ9 327 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 OR13A1Q8NGR1 328 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 RFESDQ8TAC1 157 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 RAB2BQ8WUD1 216 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 CANT1Q8WVQ1 401 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 C10orf35Q96D05 121 aa3.66□□□□□ -1.82
ATXN3-239ENST00000556315 NSMCE2Q96MF7 247 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms