RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 DOPEY1Q5JWR5 2465 aa12.21□□□□□ -0.46
VPS33B-205ENST00000556096 RPS10-NUDT3A0A1W2PQS6 291 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 E5RGE8 158 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 TNFRSF13BO14836 293 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ST8SIA3O43173 380 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 KCNAB3O43448 404 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 S100A1P23297 94 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 RAB14P61106 215 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 MORN2Q502X0 79 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 FOXRED2Q8IWF2 684 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 MUC15Q8N387 334 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 FAM212BQ9NTI7 297 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 RNF150Q9ULK6 438 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 POMT1Q9Y6A1 747 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DSCAMO60469 2012 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ICE1Q9Y2F5 2266 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 CACNA1DQ01668 2161 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 TRGV10A0A0A0MS01 117 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 A0A1B0GW55 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 LINC00862A6NCI5 91 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 MSGN1A6NI15 193 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 F5H0A9 414 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ITGB1BP1O14713 200 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ADAM20O43506 726 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 SCGB1D2O95969 90 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 HKR1P10072 659 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 COL8A1P27658 744 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 LOXL3P58215 753 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ZNF585BQ52M93 769 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4L9Q6RFH8 374 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 TCTEX1D1Q8N7M0 179 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 CCL17Q92583 94 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 LSM10Q969L4 123 aaKnown RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 PHYHIPLQ96FC7 376 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 AGMATQ9BSE5 352 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 ZNF471Q9BX82 626 aaPredicted RBP12.2□□□□□ -0.46
VPS33B-205ENST00000556096 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
VPS33B-205ENST00000556096 KBTBD11-OT1A0A1B0GTJ5 212 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 A0A1B0GU03 582 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 TAAR5O14804 337 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 SPDEFO95238 335 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 RPL12P30050 165 aaKnown RBP12.19□□□□□ -0.46
VPS33B-205ENST00000556096 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 ZNF66Q6ZN08 573 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 FAM219AQ8IW50 185 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 C5orf30Q96GV9 206 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 CLN8Q9UBY8 286 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 DOPEY2Q9Y3R5 2298 aa12.19□□□□□ -0.46
VPS33B-205ENST00000556096 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 ZNF729A6NN14 1252 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-205ENST00000556096 TMPRSS2O15393 492 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 IGKV1-39P01597 117 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 IGKV1D-39P04432 117 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 NKX2-1P43699 371 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-205ENST00000556096 P2RY1P47900 373 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 CATR1Q13166 79 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 ALKAL2Q6UX46 152 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 CYTL1Q9NRR1 136 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 PSG11Q9UQ72 335 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 GAB2Q9UQC2 676 aa12.18□□□□□ -0.46
VPS33B-205ENST00000556096 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
VPS33B-205ENST00000556096 MEX3AA1L020 520 aaKnown RBP12.17□□□□□ -0.46
VPS33B-205ENST00000556096 NDUFA2O43678 99 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 PITX3O75364 302 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 PPOXP50336 477 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 ID3Q02535 119 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
VPS33B-205ENST00000556096 GPR157Q5UAW9 335 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 DMBX1Q8NFW5 382 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 GPR146Q96CH1 333 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 HSD17B10Q99714 261 aaKnown RBP12.17□□□□□ -0.46
VPS33B-205ENST00000556096 C11orf1Q9H5F2 150 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 SDHAF2Q9NX18 166 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 TAS2R3Q9NYW6 316 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 TANC2Q9HCD6 1990 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 ST8SIA5O15466 376 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 FSTL3O95633 263 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 MMP9P14780 707 aa12.17□□□□□ -0.46
VPS33B-205ENST00000556096 ZNF16P17020 682 aaPredicted RBP12.17□□□□□ -0.46
VPS33B-205ENST00000556096 LTC4SQ16873 150 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms