RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 VWA1Q6PCB0 445 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 FADS6Q8N9I5 356 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 GATAD1Q8WUU5 269 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 DOK5Q9P104 306 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 RABAC1Q9UI14 185 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 KCNAB3O43448 404 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 GLRXP35754 106 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 RPS4XP62701 263 aaKnown RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 SAPCD1Q5SSQ6 148 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 C16orf47Q6ZP98 133 aaPredicted RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 ADIPOR1Q96A54 375 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 MIXL1Q9H2W2 232 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 PPP1R3EQ9H7J1 279 aa9.28□□□□□ -0.92
ACTN1-216ENST00000556083 CISD1Q9NZ45 108 aaKnown RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 RCC2Q9P258 522 aaKnown RBP9.28□□□□□ -0.92
ACTN1-216ENST00000556083 TRPM6Q9BX84 2022 aa9.27□□□□□ -0.92
ACTN1-216ENST00000556083 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 UPK3AO75631 287 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 MEF2CQ06413 473 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-216ENST00000556083 ZNF146Q15072 292 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 PDCD1Q15116 288 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 G6PC2Q9NQR9 355 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 HS3ST3B1Q9Y662 390 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 TRAV8-7A0A075B6U6 113 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 ZNF207O43670 478 aaKnown RBP9.27□□□□□ -0.93
ACTN1-216ENST00000556083 CYB5R3P00387 301 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-216ENST00000556083 ARG1P05089 322 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 SP9P0CG40 484 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 ATP6V0CP27449 155 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 PSMB2P49721 201 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 UNQ9370/PRO34162Q6UXP9 181 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 FAM222BQ8WU58 562 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 C7orf77A4D0Y5 90 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 PAGE4O60829 102 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 G6PCP35575 357 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 RPS11P62280 158 aaKnown RBP eCLIP9.27□□□□□ -0.93
ACTN1-216ENST00000556083 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 FHL5Q5TD97 284 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 Q6ZT83 130 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 FBLIM1Q8WUP2 373 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 PSMG3Q9BT73 122 aaPredicted RBP9.27□□□□□ -0.93
ACTN1-216ENST00000556083 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 CALYQ9NYX4 217 aa9.27□□□□□ -0.93
ACTN1-216ENST00000556083 A0A0G2JLM5 398 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 PSG2P11465 335 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 NAT1P18440 290 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 C9orf62Q8N4C0 152 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 TMEM252Q8N6L7 170 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 OSR1Q8TAX0 266 aaPredicted RBP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 SMIM8Q96KF7 97 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 SMCHD1A6NHR9 2005 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 CEACAM1P13688 526 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 SUCLG1P53597 346 aaKnown RBP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 AESQ08117 197 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 SRSF9Q13242 221 aaKnown RBP eCLIP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 RRN3P1Q2M238 152 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 OTPQ5XKR4 325 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 LYZL2Q7Z4W2 148 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 GLCCI1Q86VQ1 547 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 PLPPR2Q96GM1 343 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 AQP10Q96PS8 301 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 NRIP2Q9BQI9 281 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 PXMP4Q9Y6I8 212 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 H3BQ15 152 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 H7C1H1 209 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 CIRBPQ14011 172 aaKnown RBP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 TCF24Q7RTU0 167 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 ZAR1Q86SH2 424 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 EEF1AKMT3Q96AZ1 226 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 JMJD8Q96S16 334 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 FER1L6Q2WGJ9 1857 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 ZNF831Q5JPB2 1677 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 hCG_38984A0A1B0GV85 526 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 A0A1B0GW15 77 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 OR2H2O95918 312 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 C8orf88P0DMB2 117 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 PIGYQ3MUY2 71 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 ZPLD1Q8TCW7 415 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 PMCHL2Q9BQD1 86 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
ACTN1-216ENST00000556083 SRD5A3Q9H8P0 318 aa9.26□□□□□ -0.93
ACTN1-216ENST00000556083 A0A1W2PR77 199 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 GFRA1P56159 465 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 OR2D3Q8NGH3 330 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 OR10AC1Q8NH08 325 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 AQP3Q92482 292 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 TMEM54Q969K7 222 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 SCN4AP35499 1836 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 GCGP01275 180 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 RD3LP0DJH9 198 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 COX6A1P12074 109 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 CSRP1P21291 193 aaKnown RBP9.25□□□□□ -0.93
ACTN1-216ENST00000556083 APOBEC3AP31941 199 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-216ENST00000556083 MEF2BQ02080 365 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-216ENST00000556083 OR4C12Q96R67 309 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 GDF15Q99988 308 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
ACTN1-216ENST00000556083 PLSCR3Q9NRY6 295 aa9.25□□□□□ -0.93
ACTN1-216ENST00000556083 RALYQ9UKM9 306 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms