RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 J3QR06 171 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 HSD17B6O14756 317 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 SMAD7O15105 426 aaKnown RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 ARPC1BO15143 372 aaKnown RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 CTSDP07339 412 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 MMP9P14780 707 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 IL3RAP26951 378 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 GPR12P47775 334 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF134P52741 427 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 FAHD2BQ6P2I3 314 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 SLC25A48Q6ZT89 311 aaKnown RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 TMED4Q7Z7H5 227 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 CMTM1Q8IZ96 169 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 LYG1Q8N1E2 194 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 CENPSQ8N2Z9 138 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 PNKDQ8N490 385 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 LINC00311Q8N616 119 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF645Q8N7E2 425 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 CCDC168Q8NDH2 2452 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF596Q8TC21 504 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 FAHD2AQ96GK7 314 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF486Q96H40 463 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 RSRP1Q9BUV0 290 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 GHITMQ9H3K2 345 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 C7orf69Q9H7B7 122 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 GPR132Q9UNW8 380 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 VSIG4Q9Y279 399 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 AMMECR1Q9Y4X0 333 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-208ENST00000555905 AUP1Q9Y679 476 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 MED13LQ71F56 2210 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 WNK2Q9Y3S1 2297 aa9.01□□□□□ -0.97
TMEM260-208ENST00000555905 INMT-MINDY4F8WBC2 141 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 GPR31O00270 319 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 RAB29O14966 203 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 SLC31A2O15432 143 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 PEX14O75381 377 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 HOXB4P17483 251 aaPredicted RBP9□□□□□ -0.97
TMEM260-208ENST00000555905 PI3P19957 117 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 DLX1P56177 255 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 TAS2R31P59538 309 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 PRB3Q04118 309 aaPredicted RBP9□□□□□ -0.97
TMEM260-208ENST00000555905 MSMO1Q15800 293 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 PHLDA2Q53GA4 152 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 UTF1Q5T230 341 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF818PQ6ZRF7 136 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 CIARTQ8N365 385 aaPredicted RBP9□□□□□ -0.97
TMEM260-208ENST00000555905 CCDC71LQ8N9Z2 235 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF436-AS1Q8NC38 126 aaPredicted RBP9□□□□□ -0.97
TMEM260-208ENST00000555905 ZBTB34Q8NCN2 500 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 BEND2Q8NDZ0 799 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 UPRTQ96BW1 309 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 ABHD14BQ96IU4 210 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 AKR1E2Q96JD6 320 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 TBX15Q96SF7 602 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 AGMATQ9BSE5 352 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 MARVELD1Q9BSK0 173 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 IFI27L2Q9H2X8 130 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 CCL28Q9NRJ3 127 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 PIPOXQ9P0Z9 390 aa9□□□□□ -0.97
TMEM260-208ENST00000555905 ITPR3Q14573 2671 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.99□□□□□ -0.973e-6■■■■□ 24
TMEM260-208ENST00000555905 DHFRP00374 187 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 ARG1P05089 322 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
TMEM260-208ENST00000555905 AKR1C4P17516 323 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 GNRHRP30968 328 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 UBE2E1P51965 193 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 RAG2P55895 527 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 PIGPP57054 158 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 RAB25P57735 213 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 KLRD1Q13241 179 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 C11orf88Q6PI97 169 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 LDLRAD3Q86YD5 345 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 DRAM1Q8N682 238 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 BVESQ8NE79 360 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 LHX4Q969G2 390 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 S1PR3Q99500 378 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 RTBDNQ9BSG5 229 aaPredicted RBP8.99□□□□□ -0.97
TMEM260-208ENST00000555905 C5orf66Q9H5L9 145 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 SLC2A9Q9NRM0 540 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 GAB2Q9UQC2 676 aa8.99□□□□□ -0.97
TMEM260-208ENST00000555905 SAA2-SAA4A0A096LPE2 208 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 TEX13DA0A0J9YY54 714 aaPredicted RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 RNF212BA8MTL3 300 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 RNASEK-C17orf49H0YIS7 233 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 MPPED1O15442 326 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 IGLV1-47P01700 117 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 SAA2P0DJI9 122 aaPredicted RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 ANXA7P20073 488 aaKnown RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 CEACAM3P40198 252 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 LGALS4P56470 323 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 UBE2MP61081 183 aaKnown RBP8.98□□□□□ -0.97
TMEM260-208ENST00000555905 RND3P61587 244 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 HLA-DRB5Q30154 266 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 C4orf46Q504U0 113 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 TMEM128Q5BJH2 165 aa8.98□□□□□ -0.97
TMEM260-208ENST00000555905 ZNF626Q68DY1 528 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms