RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 LRRC75A-AS1Q8N1F1 130 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 MBD6Q96DN6 1003 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 AIFM2Q9BRQ8 373 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 ALX4Q9H161 411 aaPredicted RBP8.36□□□□□ -1.07
SRP54-208ENST00000555557 GHITMQ9H3K2 345 aa8.36□□□□□ -1.07
SRP54-208ENST00000555557 GPR31O00270 319 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 RGS11O94810 467 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 USF1P22415 310 aaPredicted RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 SUPT4H1P63272 117 aaKnown RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 PAX2Q02962 417 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 DHRS2Q13268 280 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 SLC9A3R2Q15599 337 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 TMEM128Q5BJH2 165 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 METTL11BQ5VVY1 283 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 LPCAT3Q6P1A2 487 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 BTNL3Q6UXE8 466 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 C1orf229Q6ZS94 237 aaPredicted RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 Q8N7P7 452 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 OR52M1Q8NGK5 317 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 CASTOR1Q8WTX7 329 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 RTN4IP1Q8WWV3 396 aaPredicted RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 C5orf30Q96GV9 206 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 OR51J1Q9H342 316 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 SIRT7Q9NRC8 400 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 ITPR2Q14571 2701 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 PRRC2AP48634 2157 aaKnown RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 TEX13DA0A0J9YY54 714 aaPredicted RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 A0A1W2PPH5 198 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 C9orf170A2RU37 121 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 C7orf66A4D0T2 115 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 A8MXK9 166 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 PRAF2O60831 178 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 TSPAN9O75954 239 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 IL5P05113 134 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 SLC25A16P16260 332 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 CTRB1P17538 263 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 HTR2BP41595 481 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 LINC00205P59089 165 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
SRP54-208ENST00000555557 DHODHQ02127 395 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 SP6Q3SY56 376 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 LIN54Q6MZP7 749 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 ZNF767PQ75MW2 155 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 DRAM1Q8N682 238 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 UXS1Q8NBZ7 420 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 ZNF439Q8NDP4 499 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 OR10A7Q8NGE5 316 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 EDARADDQ8WWZ3 215 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 DMRTB1Q96MA1 342 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 Q96MF0 132 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 ABHD14AQ9BUJ0 271 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 IFI27L2Q9H2X8 130 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 NUP50Q9UKX7 468 aa8.35□□□□□ -1.07
SRP54-208ENST00000555557 A0A096LNT2 108 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 CRYM-AS1A6NIL9 109 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 MPPED1O15442 326 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 PROP1O75360 226 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 FOXH1O75593 365 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 PGLYRP1O75594 196 aaPredicted RBP8.34□□□□□ -1.07
SRP54-208ENST00000555557 COX7A1P24310 79 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 TAS2R31P59538 309 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 RPL39P5Q59GN2 51 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 ZNF626Q68DY1 528 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 LYG2Q86SG7 212 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 PDZD9Q8IXQ8 264 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 LYG1Q8N1E2 194 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 ABHD12Q8N2K0 398 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 ZNF645Q8N7E2 425 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 BVESQ8NE79 360 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 ZNF431Q8TF32 576 aaPredicted RBP8.34□□□□□ -1.07
SRP54-208ENST00000555557 CITED4Q96RK1 184 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 TMEM133Q9H2Q1 129 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 SDHAF2Q9NX18 166 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 SESN1Q9Y6P5 492 aa8.34□□□□□ -1.07
SRP54-208ENST00000555557 WNK2Q9Y3S1 2297 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 ENSAO43768 121 aaKnown RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 SSNA1O43805 119 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 CREBL2O60519 120 aaPredicted RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 SFT2D2O95562 160 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 GPR12P47775 334 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 Q3ZCU0 254 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 FAHD2BQ6P2I3 314 aaPredicted RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 SLC25A48Q6ZT89 311 aaKnown RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 SGPP2Q8IWX5 399 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 ODF3L1Q8IXM7 274 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 CMTM1Q8IZ96 169 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 WFDC11Q8NEX6 87 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 OR51H1Q8NH63 302 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 RBMXL1Q96E39 390 aaKnown RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 FAHD2AQ96GK7 314 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 TP53RKQ96S44 253 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms