RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 LIPFP07098 398 aa8.78□□□□□ -1
TDP1-211ENST00000555178 MMP9P14780 707 aa8.78□□□□□ -1
TDP1-211ENST00000555178 MECP2P51608 486 aaKnown RBP8.78□□□□□ -1
TDP1-211ENST00000555178 LUMP51884 338 aaPredicted RBP8.78□□□□□ -1
TDP1-211ENST00000555178 C4orf46Q504U0 113 aa8.78□□□□□ -1
TDP1-211ENST00000555178 SLC25A42Q86VD7 318 aa8.78□□□□□ -1
TDP1-211ENST00000555178 OR2AK2Q8NG84 335 aa8.78□□□□□ -1
TDP1-211ENST00000555178 TBX15Q96SF7 602 aa8.78□□□□□ -1
TDP1-211ENST00000555178 RSRP1Q9BUV0 290 aa8.78□□□□□ -1
TDP1-211ENST00000555178 TOLLIPQ9H0E2 274 aa8.78□□□□□ -1
TDP1-211ENST00000555178 SIRPDQ9H106 197 aa8.78□□□□□ -1
TDP1-211ENST00000555178 IFI27L2Q9H2X8 130 aa8.78□□□□□ -1
TDP1-211ENST00000555178 IGHV3OR16-10A0A075B7F0 116 aa8.78□□□□□ -1
TDP1-211ENST00000555178 YPEL1O60688 119 aa8.78□□□□□ -1
TDP1-211ENST00000555178 CTSDP07339 412 aaPredicted RBP8.78□□□□□ -1
TDP1-211ENST00000555178 MSMBP08118 114 aa8.78□□□□□ -1
TDP1-211ENST00000555178 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
TDP1-211ENST00000555178 VAMP1P23763 118 aa8.78□□□□□ -1
TDP1-211ENST00000555178 COX7A1P24310 79 aa8.78□□□□□ -1
TDP1-211ENST00000555178 DHRS2Q13268 280 aa8.78□□□□□ -1
TDP1-211ENST00000555178 SLC9A3R2Q15599 337 aa8.78□□□□□ -1
TDP1-211ENST00000555178 RPL39P5Q59GN2 51 aa8.78□□□□□ -1
TDP1-211ENST00000555178 LIN54Q6MZP7 749 aa8.78□□□□□ -1
TDP1-211ENST00000555178 GLDNQ6ZMI3 551 aaPredicted RBP8.78□□□□□ -1
TDP1-211ENST00000555178 SLC38A6Q8IZM9 456 aa8.78□□□□□ -1
TDP1-211ENST00000555178 DRAM1Q8N682 238 aa8.78□□□□□ -1
TDP1-211ENST00000555178 TNFRSF14Q92956 283 aa8.78□□□□□ -1
TDP1-211ENST00000555178 YPEL2Q96QA6 119 aa8.78□□□□□ -1
TDP1-211ENST00000555178 ABHD14AQ9BUJ0 271 aa8.78□□□□□ -1
TDP1-211ENST00000555178 GHITMQ9H3K2 345 aa8.78□□□□□ -1
TDP1-211ENST00000555178 HIF1ANQ9NWT6 349 aa8.78□□□□□ -1
TDP1-211ENST00000555178 C14orf166Q9Y224 244 aaKnown RBP8.78□□□□□ -1
TDP1-211ENST00000555178 POLR3KQ9Y2Y1 108 aaPredicted RBP8.78□□□□□ -1
TDP1-211ENST00000555178 INSIG2Q9Y5U4 225 aa8.78□□□□□ -1
TDP1-211ENST00000555178 C7orf66A4D0T2 115 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 PROP1O75360 226 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 FOXH1O75593 365 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 DHFRP00374 187 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 TGFAP01135 160 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 HLA-AP01891 365 aaKnown RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 DVL1P1P54792 670 aaPredicted RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 UCP3P55916 312 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 SURF2Q15527 256 aaPredicted RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 SP6Q3SY56 376 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 Q3ZCU0 254 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 ABCA11PQ4W5N1 156 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 DRAXINQ8NBI3 349 aaPredicted RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 CASTOR1Q8WTX7 329 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 PCGF1Q9BSM1 259 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 TEP1Q99973 2627 aaKnown RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 RNASEK-C17orf49H0YIS7 233 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 MTORP42345 2549 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 RAG2P55895 527 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 PAX8Q06710 450 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 DIAPH2-AS1Q14236 149 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 CD276Q5ZPR3 534 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 VMO1Q7Z5L0 202 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 TBC1D26Q86UD7 250 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 ODF3L1Q8IXM7 274 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 OR51H1Q8NH63 302 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 C17orf50Q8WW18 174 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 RTN4IP1Q8WWV3 396 aaPredicted RBP8.77□□□□□ -1.01
TDP1-211ENST00000555178 TMEM133Q9H2Q1 129 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 SDHAF2Q9NX18 166 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 SESN1Q9Y6P5 492 aa8.77□□□□□ -1.01
TDP1-211ENST00000555178 SAA2-SAA4A0A096LPE2 208 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 C9orf170A2RU37 121 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 CRYM-AS1A6NIL9 109 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 B4DSR2 109 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 GPR31O00270 319 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 ENSAO43768 121 aaKnown RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 SAA2P0DJI9 122 aaPredicted RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 ECI1P42126 302 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 BCAP31P51572 246 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 RPL30P62888 115 aaKnown RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 CD300CQ08708 224 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 C2orf68Q2NKX9 166 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 OR2B11Q5JQS5 317 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 ZNF626Q68DY1 528 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 SLC25A48Q6ZT89 311 aaKnown RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 LYG1Q8N1E2 194 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 ZNF645Q8N7E2 425 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 LINC01356Q8N9X3 169 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 UXS1Q8NBZ7 420 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 OR52M1Q8NGK5 317 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 ZFAND1Q8TCF1 268 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 TMEM186Q96B77 213 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 TP53RKQ96S44 253 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 F8P00451 2351 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 IGHV2-26A0A0B4J1V2 119 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 A8MV72 311 aaPredicted RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 PGLYRP1O75594 196 aaPredicted RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 OR5AC1P0C628 307 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 DHODHQ02127 395 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 ANKRD55Q3KP44 614 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 TMEM128Q5BJH2 165 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 FAHD2BQ6P2I3 314 aaPredicted RBP8.76□□□□□ -1.01
TDP1-211ENST00000555178 ABHD12Q8N2K0 398 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 BVESQ8NE79 360 aa8.76□□□□□ -1.01
TDP1-211ENST00000555178 EDARADDQ8WWZ3 215 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms