RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF2Q9BSG1 426 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-215ENST00000554997 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 MS4A7Q9GZW8 240 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-215ENST00000554997 PARP12Q9H0J9 701 aaKnown RBP8.27□□□□□ -1.09
SYNE2-215ENST00000554997 MEGF9Q9H1U4 602 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 HRASLSQ9HDD0 168 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 PIPOXQ9P0Z9 390 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 RNF150Q9ULK6 438 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 AMMECR1Q9Y4X0 333 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-215ENST00000554997 ZANQ9Y493 2812 aa8.27□□□□□ -1.09
SYNE2-215ENST00000554997 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 ABCA1O95477 2261 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 NAP1L6A6NFF2 107 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 CENPXA8MT69 81 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 OOSP1A8MZH6 123 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 PLA2G10O15496 165 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 UPK1BO75841 260 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 PPYP01298 95 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 GAPDHP04406 335 aaKnown RBP8.26□□□□□ -1.09
SYNE2-215ENST00000554997 EPHA1P21709 976 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 IL3RAP26951 378 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF137PP52743 207 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 UCP3P55916 312 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LDLRAD2Q5SZI1 272 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 AADACL3Q5VUY0 350 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 RUSC1-AS1Q66K80 236 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LPCAT3Q6P1A2 487 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 IL17RELQ6ZVW7 336 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LHFPL4Q7Z7J7 247 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LHFPL1Q86WI0 220 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LDLRAD3Q86YD5 345 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 LYG1Q8N1E2 194 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 OR4C16Q8NGL9 310 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 OR56B4Q8NH76 319 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 MOB3AQ96BX8 217 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
SYNE2-215ENST00000554997 IFI27L2Q9H2X8 130 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 PRDM13Q9H4Q3 707 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 ZNRD1Q9P1U0 126 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF221Q9UK13 617 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 FAM96BQ9Y3D0 163 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 RBM7Q9Y580 266 aaKnown RBP8.26□□□□□ -1.09
SYNE2-215ENST00000554997 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.26□□□□□ -1.09
SYNE2-215ENST00000554997 TLN2Q9Y4G6 2542 aa8.26□□□□□ -1.09
SYNE2-215ENST00000554997 DSCAML1Q8TD84 2053 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 IGKV1D-13A0A0B4J2D9 117 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 A0A0U1RQK1 487 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 OR5H14A6NHG9 310 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 PROP1O75360 226 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 IGLV2-14P01704 120 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 AMY2AP04746 511 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 IGKV1-13P0DP09 117 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 GNRHRP30968 328 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 GPR12P47775 334 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 IFITM3Q01628 133 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SCGB2A2Q13296 93 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 MSMO1Q15800 293 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SSX2Q16385 188 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 TUSC1Q2TAM9 212 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 PLA1AQ53H76 456 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 BCL6BQ8N143 479 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-215ENST00000554997 ZBTB34Q8NCN2 500 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 OR51S1Q8NGJ8 323 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 C17orf50Q8WW18 174 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 BORCS5Q969J3 196 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 ABHD14BQ96IU4 210 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 S1PR3Q99500 378 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 PRRT1Q99946 306 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF251Q9BRH9 671 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 ABCB10Q9NRK6 738 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 MCUBQ9NWR8 336 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SLC2A8Q9NY64 477 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SCP2D1Q9UJQ7 156 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 HILPDAQ9Y5L2 63 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SOX21Q9Y651 276 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-215ENST00000554997 C2CD3Q4AC94 2353 aa8.25□□□□□ -1.09
SYNE2-215ENST00000554997 SETD2Q9BYW2 2564 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-215ENST00000554997 KIAA2026Q5HYC2 2103 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 LINC00854A0A1B0GVQ3 168 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 CRLF1O75462 422 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 FBP1P09467 338 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SRD5A1P18405 259 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 ECI1P42126 302 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 HERV-K104P61576 105 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 ZNF816Q0VGE8 651 aaPredicted RBP8.24□□□□□ -1.09
SYNE2-215ENST00000554997 DIAPH2-AS1Q14236 149 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 AANATQ16613 207 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 DEFB112Q30KQ8 113 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 SCGB2B2Q4G0G5 96 aa8.24□□□□□ -1.09
SYNE2-215ENST00000554997 CCDC144NLQ6NUI1 221 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms