RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 LGI3Q8N145 548 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ZNF645Q8N7E2 425 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 OR52M1Q8NGK5 317 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 MRGPRDQ8TDS7 321 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 CORO2AQ92828 525 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 NKX6-2Q9C056 277 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 NGBQ9NPG2 151 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 KCNIP3Q9Y2W7 256 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 A0A0G2JRQ6 117 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 SIGLEC5O15389 551 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 FSTL3O95633 263 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 MBPP02686 304 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 LUMP51884 338 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 SELENOVP59797 346 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 TLE1Q04724 770 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 C21orf62-AS1Q17RA5 79 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 LRRC37A5PQ49AS3 106 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 C11orf71Q6IPW1 123 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 FAM219AQ8IW50 185 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ODF3L1Q8IXM7 274 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ZNF295-AS1Q8N0V1 137 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ZCCHC24Q8N2G6 241 aaKnown RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 DRAM1Q8N682 238 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 OR1S1Q8NH92 325 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 UBALD1Q8TB05 177 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 GALMQ96C23 342 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 CXorf58Q96LI9 332 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 TMED3Q9Y3Q3 217 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 K7EPK0 472 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 PROP1O75360 226 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 APOC3P02656 99 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 HKR1P10072 659 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 TNFSF4P23510 183 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 SRPXP78539 464 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 IAH1Q2TAA2 248 aaPredicted RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 FAM71E2Q8N5Q1 922 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 ZNF439Q8NDP4 499 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 STOML3Q8TAV4 291 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 C14orf79Q96F83 325 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 LRRC46Q96FV0 321 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 METTL8Q9H825 291 aaKnown RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 DNAJB11Q9UBS4 358 aa7.38□□□□□ -1.23
TDP1-210ENST00000554976 RCL1Q9Y2P8 373 aaKnown RBP7.38□□□□□ -1.23
TDP1-210ENST00000554976 B9A039 149 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 LGALS8O00214 317 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 CD3EP07766 207 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 AGAP20933 346 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 GABRA2P47869 451 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 RAB4BP61018 213 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 CCL8P80075 99 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 FGFRL1Q8N441 504 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 IL1F10Q8WWZ1 152 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 PPP1R3CQ9UQK1 317 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 RNF115Q9Y4L5 304 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 ITGB1BP1O14713 200 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 TNFSF12O43508 249 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 YPEL1O60688 119 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 SLC25A6P12236 298 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 TNFRSF1AP19438 455 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 UQCRFS1P47985 274 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 BEX5Q5H9J7 111 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 TMEM268Q5VZI3 342 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 C1orf229Q6ZS94 237 aaPredicted RBP7.37□□□□□ -1.23
TDP1-210ENST00000554976 ZBTB34Q8NCN2 500 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 ITLN2Q8WWU7 325 aaPredicted RBP7.37□□□□□ -1.23
TDP1-210ENST00000554976 YPEL2Q96QA6 119 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 KCNIP1Q9NZI2 227 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 COMMD9Q9P000 198 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 JPT1Q9UK76 154 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 DMRT1Q9Y5R6 373 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 ARFGEF3Q5TH69 2177 aa7.37□□□□□ -1.23
TDP1-210ENST00000554976 GPR37O15354 613 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 RP2O75695 350 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 IGFBP2P18065 325 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 ZNF134P52741 427 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 TAS2R60P59551 318 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 RPL30P62888 115 aaKnown RBP7.36□□□□□ -1.23
TDP1-210ENST00000554976 MORN2Q502X0 79 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 C4orf17Q53FE4 359 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 PRR18Q8N4B5 295 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 THAP6Q8TBB0 222 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 ARL6Q9H0F7 186 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 ZNF665Q9H7R5 613 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 FAM212BQ9NTI7 297 aaPredicted RBP7.36□□□□□ -1.23
TDP1-210ENST00000554976 GAB2Q9UQC2 676 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 CACNA1DQ01668 2161 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 TLN1Q9Y490 2541 aaKnown RBP7.36□□□□□ -1.23
TDP1-210ENST00000554976 ADGRG4Q8IZF6 3080 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 IGKV1-5P01602 117 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 GYPAP02724 150 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 PPP1CCP36873 323 aaKnown RBP7.36□□□□□ -1.23
TDP1-210ENST00000554976 PCP4P48539 62 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 PPOXP50336 477 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 RNF212Q495C1 297 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 ZNF808Q8N4W9 903 aaPredicted RBP7.36□□□□□ -1.23
TDP1-210ENST00000554976 FAM216BQ8N7L0 139 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 DCUN1D4Q92564 292 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 FAM122AQ96E09 287 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 ABHD14BQ96IU4 210 aa7.36□□□□□ -1.23
TDP1-210ENST00000554976 KAAG1Q9UBP8 84 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms