RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 TAF9BQ9HBM6 251 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 CYTL1Q9NRR1 136 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 METRNQ9UJH8 293 aa9.29□□□□□ -0.92
SHMT2-216ENST00000554975 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 UBE2J1Q9Y385 318 aaPredicted RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 LSM5Q9Y4Y9 91 aaKnown RBP9.29□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF503-AS2A6NEH8 195 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 MSGN1A6NI15 193 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 MPPED1O15442 326 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 LILRA1O75019 489 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 HKR1P10072 659 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 SLC25A6P12236 298 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF44P15621 663 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 CBR1P16152 277 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 UCP1P25874 307 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 APOBEC3AP31941 199 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 SULT1A2P50226 295 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 PRSS12P56730 875 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 TAGLNQ01995 201 aaKnown RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 OR8G1Q15617 311 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 AWAT1Q58HT5 328 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF695Q8IW36 515 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 SUMF2Q8NBJ7 301 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 FAM216AQ8WUB2 273 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 TMED6Q8WW62 240 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 DYRK2Q92630 601 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 RRNAD1Q96FB5 475 aaKnown RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM56Q96MV1 263 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 BCL2L14Q9BZR8 327 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 SLC25A31Q9H0C2 315 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 OR51I2Q9H344 312 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 FAM212BQ9NTI7 297 aaPredicted RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 LIN7CQ9NUP9 197 aaKnown RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 MTCH1Q9NZJ7 389 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 FBXL17Q9UF56 701 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 STRAPQ9Y3F4 350 aaKnown RBP9.28□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM56-RWDD3S4R434 201 aa9.28□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF705EA8MWA4 302 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-216ENST00000554975 NGFP01138 241 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 SEC11BP0C7V7 166 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 CCL2P13500 99 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 VDAC1P21796 283 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 F2RL1P55085 397 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 BAXQ07812 192 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 PJVKQ0ZLH3 352 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 MIDNQ504T8 468 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 TMEM268Q5VZI3 342 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 MYPOPQ86VE0 399 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-216ENST00000554975 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 SVBPQ8N300 66 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 FAM169BQ8N8A8 192 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 LINC01356Q8N9X3 169 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 BHLHE23Q8NDY6 225 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 LFNGQ8NES3 379 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 OR1S2Q8NGQ3 325 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 OR10J5Q8NHC4 309 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 MRPL30Q8TCC3 161 aaKnown RBP9.27□□□□□ -0.93
SHMT2-216ENST00000554975 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 NARS2Q96I59 477 aaKnown RBP9.27□□□□□ -0.93
SHMT2-216ENST00000554975 AKR1E2Q96JD6 320 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 FGF23Q9GZV9 251 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-216ENST00000554975 SPEF1Q9Y4P9 236 aa9.27□□□□□ -0.93
SHMT2-216ENST00000554975 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 MPTX1A8MV57 137 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 VSTM5A8MXK1 200 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 WRBO00258 174 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 SYNGR1O43759 233 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 IGKV3-15P01624 115 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 IGLV1-44P01699 117 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 PGA5P0DJD9 388 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 CD200P41217 278 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 NKX2-1P43699 371 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-216ENST00000554975 VAMP2P63027 116 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 MSMO1Q15800 293 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 C3orf36Q3SXR2 165 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 FAM76BQ5HYJ3 339 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 OR2T2Q6IF00 324 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 TRAT1Q6PIZ9 186 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 TBC1D26Q86UD7 250 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 FOXRED2Q8IWF2 684 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 SLC35G3Q8N808 338 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 OR4D5Q8NGN0 318 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 SMIM8Q96KF7 97 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 OR2S2Q9NQN1 319 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 PRR13Q9NZ81 148 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 OR2W1Q9Y3N9 320 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 ARHGAP32A7KAX9 2087 aa9.26□□□□□ -0.93
SHMT2-216ENST00000554975 SH2D1BO14796 132 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 PITX3O75364 302 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 MED6O75586 246 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 ATG12O94817 140 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 NXPH2O95156 264 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 APOC3P02656 99 aa9.25□□□□□ -0.93
SHMT2-216ENST00000554975 MBPP02686 304 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms