RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HAGHLQ6PII5 290 aaPredicted RBP14.53□□□□□ -0.08
SHOX-204ENST00000554971 SELENOHQ8IZQ5 122 aaKnown RBP14.53□□□□□ -0.08
SHOX-204ENST00000554971 SUMF2Q8NBJ7 301 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 OR52M1Q8NGK5 317 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 NEK7Q8TDX7 302 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 RTL8AQ9BWD3 113 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 TLNRD1Q9H1K6 362 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 C11orf1Q9H5F2 150 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 MSL2Q9HCI7 577 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 VSTM5A8MXK1 200 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 ZNF205O95201 554 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 HEXAP06865 529 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 SCTP09683 121 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 SLC25A6P12236 298 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 NKX2-1P43699 371 aaPredicted RBP14.53□□□□□ -0.08
SHOX-204ENST00000554971 ZNF266Q14584 549 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 FAM76BQ5HYJ3 339 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 FAM219AQ8IW50 185 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 MRPL30Q8TCC3 161 aaKnown RBP14.53□□□□□ -0.08
SHOX-204ENST00000554971 ERGIC1Q969X5 290 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 KIRREL1Q96J84 757 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 POLDIP2Q9Y2S7 368 aa14.53□□□□□ -0.08
SHOX-204ENST00000554971 IQCF6A8MYZ5 107 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 H0Y980 276 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 SYNGR1O43759 233 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 MUC1P15941 1255 aaPredicted RBP14.52□□□□□ -0.09
SHOX-204ENST00000554971 SPIN3Q5JUX0 258 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 Q6ZRG5 221 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 OR2C3Q8N628 320 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 SECTM1Q8WVN6 248 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 CABLES2Q9BTV7 478 aa14.52□□□□□ -0.09
SHOX-204ENST00000554971 RCL1Q9Y2P8 373 aaKnown RBP14.52□□□□□ -0.09
SHOX-204ENST00000554971 FAM74A7A6NL05 159 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 DEGS1O15121 323 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 NUPL2O15504 423 aaKnown RBP14.51□□□□□ -0.09
SHOX-204ENST00000554971 TIMM8AO60220 97 aaPredicted RBP14.51□□□□□ -0.09
SHOX-204ENST00000554971 ACAA1P09110 424 aaPredicted RBP14.51□□□□□ -0.09
SHOX-204ENST00000554971 SELEP16581 610 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 PPOXP50336 477 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 AKR1C2P52895 323 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 SELENOVP59797 346 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 SRSF3P84103 164 aaKnown RBP14.51□□□□□ -0.09
SHOX-204ENST00000554971 FLI1Q01543 452 aaPredicted RBP14.51□□□□□ -0.09
SHOX-204ENST00000554971 AKR1C1Q04828 323 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 GUCA2BQ16661 112 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 FAM74A3Q4VXF1 159 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 ZNF818PQ6ZRF7 136 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 GAPTQ8N292 157 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 SMDT1Q9H4I9 107 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 OR2W1Q9Y3N9 320 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 LY6HO94772 140 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 TSPAN15O95858 294 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 PAX1P15863 534 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 BAXQ07812 192 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 HERPUD1Q15011 391 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 PEA15Q15121 130 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 LFNGQ8NES3 379 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 OR10J5Q8NHC4 309 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 NINJ1Q92982 152 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 MBD6Q96DN6 1003 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 SMIM3Q9BZL3 60 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 KPTNQ9Y664 436 aa14.51□□□□□ -0.09
SHOX-204ENST00000554971 DYSFO75923 2080 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 TANC2Q9HCD6 1990 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 TRAV24A0A0B4J272 114 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 A0A1B0GWJ7 208 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 C17orf100A8MU93 164 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 UMAD1C9J7I0 102 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 H7C2Y5 167 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 MLNRO43193 412 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 ARHGDIBP52566 201 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 HLA-DRB3P79483 266 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 ID3Q02535 119 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 DEFB113Q30KQ7 82 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 SPRNQ5BIV9 151 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 NMSQ5H8A3 153 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 H1FOOQ8IZA3 346 aaPredicted RBP14.5□□□□□ -0.09
SHOX-204ENST00000554971 OR8G5Q8NG78 346 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 AKR1E2Q96JD6 320 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 DYNLRB1Q9NP97 96 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 LYRM2Q9NU23 88 aaPredicted RBP14.5□□□□□ -0.09
SHOX-204ENST00000554971 PLA2G2EQ9NZK7 142 aa14.5□□□□□ -0.09
SHOX-204ENST00000554971 A0A1B0GW64 132 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 PITX3O75364 302 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 IGHV4-39P01824 125 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 EWSR1Q01844 656 aaKnown RBP eCLIP14.49□□□□□ -0.09
SHOX-204ENST00000554971 WFDC1Q9HC57 220 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 CACFD1Q9UGQ2 172 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 ZDHHC8Q9ULC8 765 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 IGKV1-6A0A0C4DH72 117 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 H0YL77 283 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 PGLYRP1O75594 196 aaPredicted RBP14.49□□□□□ -0.09
SHOX-204ENST00000554971 IGHV1-46P01743 117 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 SFTA3P0C7M3 94 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 F2RP25116 425 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 VAMP2P63027 116 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 OR8G1Q15617 311 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 PERPQ96FX8 193 aa14.49□□□□□ -0.09
SHOX-204ENST00000554971 MS4A5Q9H3V2 200 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms