RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TXNL1O43396 289 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 FBP1P09467 338 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 FAM157CP0CG43 387 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 NFYAP23511 347 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 FAUP35544 74 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 TSPAN5P62079 268 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 CCDC144NLQ6NUI1 221 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 ST6GALNAC6Q969X2 333 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 PARP12Q9H0J9 701 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 PRDM13Q9H4Q3 707 aa13.33□□□□□ -0.28
SPTLC2-203ENST00000554901 MXRA5Q9NR99 2828 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 TEP1Q99973 2627 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 SVEP1Q4LDE5 3571 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 PPYP01298 95 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 INPP1P49441 399 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 LUMP51884 338 aaPredicted RBP13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 ARHGDIBP52566 201 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 KLF9Q13886 244 aaPredicted RBP13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 MSMO1Q15800 293 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 BAK1Q16611 211 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 LYG1Q8N1E2 194 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 BORCS5Q969J3 196 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 RPEQ96AT9 228 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 AJUBAQ96IF1 538 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 S1PR3Q99500 378 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 MEGF9Q9H1U4 602 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF221Q9UK13 617 aa13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 RBM7Q9Y580 266 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
SPTLC2-203ENST00000554901 A0A0U1RQK1 487 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 DISC1C4P0D8 188 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 M0QYG6 137 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 ST8SIA5O15466 376 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 OR8U9P0C7N5 309 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 IL7P13232 177 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 HERV-K104P61576 105 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF816Q0VGE8 651 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 AANATQ16613 207 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 LDLRAD2Q5SZI1 272 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 LHFPL4Q7Z7J7 247 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 ODF3L1Q8IXM7 274 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 OR8H3Q8N146 312 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 OR8U1Q8NH10 309 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 MOB3AQ96BX8 217 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF2Q9BSG1 426 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 TINAGL1Q9GZM7 467 aaPredicted RBP13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNRD1Q9P1U0 126 aa13.31□□□□□ -0.28
SPTLC2-203ENST00000554901 HSD17B6O14756 317 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 GAPDHP04406 335 aaKnown RBP13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 AADACP22760 399 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 PLA1AQ53H76 456 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF833PQ6ZTB9 187 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 OR4C16Q8NGL9 310 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 TOMM40LQ969M1 308 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 SLC2A8Q9NY64 477 aa13.3□□□□□ -0.28
SPTLC2-203ENST00000554901 SAA2-SAA4A0A096LPE2 208 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 AMY2AP04746 511 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 SAA2P0DJI9 122 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 GPR12P47775 334 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 DYNLT3P51808 116 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 SSX2Q16385 188 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF57Q68EA5 555 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 LPCAT3Q6P1A2 487 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 LDLRAD3Q86YD5 345 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 BCL6BQ8N143 479 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF645Q8N7E2 425 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 OR4D10Q8NGI6 311 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ABHD14BQ96IU4 210 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 TSC22D3Q99576 134 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 PRRT1Q99946 306 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 C7orf50Q9BRJ6 194 aaKnown RBP13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 OR2D2Q9H210 308 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 NAP1L6A6NFF2 107 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF735P0CB33 412 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ECI1P42126 302 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 UCP3P55916 312 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 LHFPL1Q86WI0 220 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 TGIF2LXQ8IUE1 241 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ZBTB34Q8NCN2 500 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 TERB2Q8NHR7 220 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 C17orf50Q8WW18 174 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 RTN4IP1Q8WWV3 396 aaPredicted RBP13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 C22orf15Q8WYQ4 148 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 ZNF251Q9BRH9 671 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 SCP2D1Q9UJQ7 156 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
SPTLC2-203ENST00000554901 IGKV1D-13A0A0B4J2D9 117 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 IGKV1-13P0DP09 117 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 HABP2Q14520 560 aaPredicted RBP13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 RBMS3Q6XE24 437 aaKnown RBP13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 OR56B4Q8NH76 319 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 AKR1E2Q96JD6 320 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 HRASLSQ9HDD0 168 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 RNF150Q9ULK6 438 aa13.28□□□□□ -0.28
SPTLC2-203ENST00000554901 ANK3Q12955 4377 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms