RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 CT45A3Q8NHU0 189 aa11.75□□□□□ -0.53
SHOX2-206ENST00000554685 TMEM186Q96B77 213 aa11.75□□□□□ -0.53
SHOX2-206ENST00000554685 PARP12Q9H0J9 701 aaKnown RBP11.75□□□□□ -0.53
SHOX2-206ENST00000554685 CCL28Q9NRJ3 127 aa11.75□□□□□ -0.53
SHOX2-206ENST00000554685 SLC2A9Q9NRM0 540 aa11.75□□□□□ -0.53
SHOX2-206ENST00000554685 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 TEX13DA0A0J9YY54 714 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-206ENST00000554685 J3QLI3 93 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 HSD17B6O14756 317 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 B3GALNT1O75752 331 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 ANXA7P20073 488 aaKnown RBP11.74□□□□□ -0.53
SHOX2-206ENST00000554685 PIGPP57054 158 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 RAB25P57735 213 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 FAM71F2Q6NXP2 309 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF818PQ6ZRF7 136 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 VMO1Q7Z5L0 202 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 SGPP2Q8IWX5 399 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 WFDC11Q8NEX6 87 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 S1PR3Q99500 378 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 AGMATQ9BSE5 352 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 RTBDNQ9BSG5 229 aaPredicted RBP11.74□□□□□ -0.53
SHOX2-206ENST00000554685 IFI27L2Q9H2X8 130 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 SIRT7Q9NRC8 400 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
SHOX2-206ENST00000554685 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 CRYM-AS1A6NIL9 109 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 IGHV3-7P01780 117 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 OR4E1P0C645 316 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 IGHV4-31P0DP07 118 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 ANXA3P12429 323 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 MMP9P14780 707 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 AKR1C4P17516 323 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 PI3P19957 117 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 COX7A1P24310 79 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF134P52741 427 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 CATR1Q13166 79 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 TATDN3Q17R31 274 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 PHLDA2Q53GA4 152 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 FAM53AQ6NSI3 398 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-206ENST00000554685 GLDNQ6ZMI3 551 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 KCTD9Q7L273 389 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 LYG1Q8N1E2 194 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 PNKDQ8N490 385 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 OR11H6Q8NGC7 330 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 RTN4IP1Q8WWV3 396 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-206ENST00000554685 HSD17B10Q99714 261 aaKnown RBP11.73□□□□□ -0.53
SHOX2-206ENST00000554685 PCGF1Q9BSM1 259 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 HIF1ANQ9NWT6 349 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 RNF150Q9ULK6 438 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 AUP1Q9Y679 476 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
SHOX2-206ENST00000554685 DOCK11Q5JSL3 2073 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 POLQO75417 2590 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 SNRPGP15A8MWD9 76 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 SLC31A2O15432 143 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 MPPED1O15442 326 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 CREBL2O60519 120 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-206ENST00000554685 CEACAM3P40198 252 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 DHODHQ02127 395 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 HLA-DRB5Q30154 266 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF626Q68DY1 528 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 CYB5R2Q6BCY4 276 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 LDLRAD3Q86YD5 345 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 TCTEX1D1Q8N7M0 179 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 ADAD2Q8NCV1 583 aaKnown RBP11.72□□□□□ -0.53
SHOX2-206ENST00000554685 MSI2Q96DH6 328 aaKnown RBP11.72□□□□□ -0.53
SHOX2-206ENST00000554685 ABHD14BQ96IU4 210 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 ADTRPQ96IZ2 230 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 NAA60Q9H7X0 242 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 LIN7CQ9NUP9 197 aaKnown RBP11.72□□□□□ -0.53
SHOX2-206ENST00000554685 SDHAF2Q9NX18 166 aa11.72□□□□□ -0.53
SHOX2-206ENST00000554685 SAA2-SAA4A0A096LPE2 208 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 A0A1W2PPE3 182 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 PGLYRP1O75594 196 aaPredicted RBP11.71□□□□□ -0.53
SHOX2-206ENST00000554685 TGFAP01135 160 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 IGLV1-47P01700 117 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 HLA-AP01891 365 aaKnown RBP11.71□□□□□ -0.53
SHOX2-206ENST00000554685 ARG1P05089 322 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 SAA2P0DJI9 122 aaPredicted RBP11.71□□□□□ -0.53
SHOX2-206ENST00000554685 HOXB4P17483 251 aaPredicted RBP11.71□□□□□ -0.53
SHOX2-206ENST00000554685 VAMP1P23763 118 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 UBE2E1P51965 193 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF137PP52743 207 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 LGALS4P56470 323 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 PPP1R1AQ13522 171 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 LYG2Q86SG7 212 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 TBC1D26Q86UD7 250 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
SHOX2-206ENST00000554685 TMEM230Q96A57 120 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 GALNT14Q96FL9 552 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 TBX15Q96SF7 602 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 BEX2Q9BXY8 128 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 C7orf69Q9H7B7 122 aa11.71□□□□□ -0.53
SHOX2-206ENST00000554685 BEX1Q9HBH7 125 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms