RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 SULT4A1Q9BR01 284 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 WNT10AQ9GZT5 417 aa8.49□□□□□ -1.05
SHMT2-215ENST00000554656 ELF5Q9UKW6 265 aaPredicted RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 TBL2Q9Y4P3 447 aaKnown RBP8.49□□□□□ -1.05
SHMT2-215ENST00000554656 C7orf66A4D0T2 115 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 MEIS3P1A6NDR6 274 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 MCRIP1C9JLW8 97 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 SH2D1BO14796 132 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 H2AFB2P0C5Z0 115 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF735P0CB33 412 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 EDDM3BP56851 147 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 GRK1Q15835 563 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 SSX2Q16385 188 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 NKAPLQ5M9Q1 402 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 Q6P435 159 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 TMEM17Q86X19 198 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 NDUFA11Q86Y39 141 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 CADM3Q8N126 398 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 GVQW1Q8N7I0 195 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 TPRX1Q8N7U7 411 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 BEST4Q8NFU0 473 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 SNAPC3Q92966 411 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 FAAP24Q9BTP7 215 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 C12orf4Q9NQ89 552 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 NUDT15Q9NV35 164 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 MCUBQ9NWR8 336 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 MGAT4AQ9UM21 535 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 COL7A1Q02388 2944 aa8.48□□□□□ -1.05
SHMT2-215ENST00000554656 hCG_2014768A0A024R1R8 64 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 hCG_1809904A0A1W2PP81 198 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 A0A1W2PPE2 198 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 A0A1W2PR64 198 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 A0A1W2PRV1 198 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 PSPNO60542 156 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 PFDN1O60925 122 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 MMP23AO75900 390 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 NAPSAO96009 420 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 AMY2AP04746 511 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 IL5P05113 134 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 FCGR3AP08637 254 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 LMO1P25800 156 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 CCR6P51684 374 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 DYNLT3P51808 116 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 SNU13P55769 128 aaKnown RBP8.47□□□□□ -1.05
SHMT2-215ENST00000554656 BLCAPP62952 87 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 MOB1BQ7L9L4 216 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 OR5AP2Q8NGF4 316 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 OR13D1Q8NGV5 346 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 OR5H2Q8NGV7 314 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 R3HDM4Q96D70 268 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 MALSU1Q96EH3 234 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 ALX4Q9H161 411 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-215ENST00000554656 C20orf85Q9H1P6 137 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 ZNF286AQ9HBT8 521 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 AURKAIP1Q9NWT8 199 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-215ENST00000554656 AK3Q9UIJ7 227 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 ANXA10Q9UJ72 324 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 HILPDAQ9Y5L2 63 aa8.47□□□□□ -1.05
SHMT2-215ENST00000554656 IGHV2-26A0A0B4J1V2 119 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 TRAV24A0A0B4J272 114 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 DEGS1O15121 323 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 PEX14O75381 377 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 HAND1O96004 215 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 IFNA6P05013 189 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 FCER2P06734 321 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF44P15621 663 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 DUSP1P28562 367 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 HRH1P35367 487 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 ECI1P42126 302 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 OR3A3P47888 321 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 PAX5Q02548 391 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 MEF2CQ06413 473 aaPredicted RBP8.46□□□□□ -1.06
SHMT2-215ENST00000554656 KIR2DS1Q14954 304 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 CDK10Q15131 360 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 TATDN3Q17R31 274 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 TCTEX1D4Q5JR98 221 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF880Q6PDB4 577 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 RTN4RL2Q86UN3 420 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 GAPTQ8N292 157 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 SUMF2Q8NBJ7 301 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 OR4S1Q8NGB4 309 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 OR4D10Q8NGI6 311 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 OR51S1Q8NGJ8 323 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 SNX22Q96L94 193 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 ZNF714Q96N38 554 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 SCGB3A2Q96PL1 93 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 TINAGL1Q9GZM7 467 aaPredicted RBP8.46□□□□□ -1.06
SHMT2-215ENST00000554656 PRSS22Q9GZN4 317 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 LINC00312Q9Y6C7 94 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 SESN1Q9Y6P5 492 aa8.46□□□□□ -1.06
SHMT2-215ENST00000554656 A0A1W2PRX2 142 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 UBE2QL1A1L167 161 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 HMX3A6NHT5 357 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 M0QYG6 137 aa8.45□□□□□ -1.06
SHMT2-215ENST00000554656 F2RL2O00254 374 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms