RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GAFA1Q96PS6 74 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF2Q9BSG1 426 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 HEXA-AS1Q9H8Q6 139 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 TNFRSF19Q9NS68 423 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 RASL12Q9NYN1 266 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 SLC23A1Q9UHI7 598 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 C14orf166Q9Y224 244 aaKnown RBP10.2□□□□□ -0.78
SHMT2-214ENST00000554604 POLDIP2Q9Y2S7 368 aa10.2□□□□□ -0.78
SHMT2-214ENST00000554604 TRBV6-6A0A0A6YYG2 114 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 MCRIP1C9JLW8 97 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 F8VVB4 439 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 F8VWA3 439 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 L7N2F9 121 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 SIGLEC5O15389 551 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 NXPH2O95156 264 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 NAPSAO96009 420 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 PSG2P11465 335 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 PRKACAP17612 351 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 CXCL2P19875 107 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 Q8IYB0 196 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 KIR3DL3Q8N743 410 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 COQ8AQ8NI60 647 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 CASTOR1Q8WTX7 329 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 DCTN5Q9BTE1 182 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 RIMS4Q9H426 269 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-214ENST00000554604 FAM96BQ9Y3D0 163 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 DSCAML1Q8TD84 2053 aa10.19□□□□□ -0.78
SHMT2-214ENST00000554604 IGKV1D-17A0A075B6S4 117 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 TRAV14DV4A0A0A6YYC5 116 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 TSC22D2O75157 780 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 CRYBA1P05813 215 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 SLC25A4P12235 298 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 PGAM2P15259 253 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 RPA2P15927 270 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 GLP1RP43220 463 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 UCP3P55916 312 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 ERVK11-1P61568 191 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 SUPT4H1P63272 117 aaKnown RBP10.18□□□□□ -0.78
SHMT2-214ENST00000554604 RBM39Q14498 530 aaKnown RBP10.18□□□□□ -0.78
SHMT2-214ENST00000554604 OPCMLQ14982 345 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 TMEM65Q6PI78 240 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 BRICD5Q6PL45 260 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 TEX261Q6UWH6 196 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 Q6YL49 198 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 ACP7Q6ZNF0 438 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 SLC7A5P1Q8MH63 180 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 POC1AQ8NBT0 407 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 ZNRF1Q8ND25 227 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 OR8H1Q8NGG4 311 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 DYRK2Q92630 601 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 PRDM13Q9H4Q3 707 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 Q9N2K0 584 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 RAB18Q9NP72 206 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 SIRT7Q9NRC8 400 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 COMMD9Q9P000 198 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 U3KQ87 197 aa10.18□□□□□ -0.78
SHMT2-214ENST00000554604 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 PGA5P0DJD9 388 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 S100A1P23297 94 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 CYCSP99999 105 aaKnown RBP10.17□□□□□ -0.78
SHMT2-214ENST00000554604 GSG1LQ6UXU4 331 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 Q6ZPA2 131 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 BATF2Q8N1L9 274 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 SSMEM1Q8WWF3 244 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 MOB3AQ96BX8 217 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 PDCD10Q9BUL8 212 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 NMES1Q9C002 83 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 FXYD6Q9H0Q3 95 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 CHMP1AQ9HD42 196 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-214ENST00000554604 IL36RNQ9UBH0 155 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 MAB21L2Q9Y586 359 aa10.17□□□□□ -0.78
SHMT2-214ENST00000554604 FXYD6-FXYD2A0A087WZ82 144 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 TRBV23-1A0A0A0MS06 115 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 A0A0U1RQK1 487 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 FAM181BA6NEQ2 426 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 CRYM-AS1A6NIL9 109 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 M0R1W7 72 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 CCSO14618 274 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 ARPC5O15511 151 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 NOS1APO75052 506 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-214ENST00000554604 MPC2O95563 127 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 IFNA7P01567 189 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF728P0DKX0 622 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 PI3P19957 117 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 S100A11P31949 105 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 PRDX2P32119 198 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 KIR2DS4P43632 304 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 PRB3Q04118 309 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-214ENST00000554604 KIR2DS1Q14954 304 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 Q6P435 159 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 ZNF880Q6PDB4 577 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 FIP1L1Q6UN15 594 aaKnown RBP10.16□□□□□ -0.78
SHMT2-214ENST00000554604 C1orf122Q6ZSJ8 110 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 TMUB2Q71RG4 321 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 KCTD9Q7L273 389 aa10.16□□□□□ -0.78
SHMT2-214ENST00000554604 SGPP2Q8IWX5 399 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms