RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TMEM59Q9BXS4 323 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 HRASLSQ9HDD0 168 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 TAS2R8Q9NYW2 309 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 PSG11Q9UQ72 335 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
SHMT2-211ENST00000554310 TRAV18A0A075B6X5 111 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 C7orf66A4D0T2 115 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 SDCBPO00560 298 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-211ENST00000554310 RBBP9O75884 186 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 SCGNO76038 276 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 MPIG6BO95866 241 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 VSIG8P0DPA2 414 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 RPS27AP62979 156 aaKnown RBP10.48□□□□□ -0.73
SHMT2-211ENST00000554310 HERPUD1Q15011 391 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 LTC4SQ16873 150 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 Q3ZCU0 254 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 SIGIRRQ6IA17 410 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 Q6ZTK2 550 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 C8orf31Q8N9H6 132 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 CCDC107Q8WV48 283 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 LEAP2Q969E1 77 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 ARL11Q969Q4 196 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 GFOD1Q9NXC2 390 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 MTFP1Q9UDX5 166 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 RAB22AQ9UL26 194 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 TRAPPC2LQ9UL33 140 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 NOTCH1P46531 2555 aa10.48□□□□□ -0.73
SHMT2-211ENST00000554310 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-211ENST00000554310 MEGF8Q7Z7M0 2845 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 C12orf77C9JDV5 145 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 SPINT2O43291 252 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 OR2F2O95006 317 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 CSF1P09603 554 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 PRSS3P35030 304 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 GNG10P50151 68 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 RAB7AP51149 207 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 RAB25P57735 213 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 RRAS2P62070 204 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-211ENST00000554310 UNC119Q13432 240 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 NKAPLQ5M9Q1 402 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 TREML4Q6UXN2 200 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 OR2W3Q7Z3T1 314 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 KLHDC1Q8N7A1 406 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 ZBTB8BQ8NAP8 495 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-211ENST00000554310 OR10X1Q8NGY0 326 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 OR56B4Q8NH76 319 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 CAPSLQ8WWF8 208 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 TM2D1Q9BX74 207 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 KCNK15Q9H427 330 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 SCPEP1Q9HB40 452 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 KLK11Q9UBX7 282 aa10.47□□□□□ -0.73
SHMT2-211ENST00000554310 A0A1W2PPI3 338 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 METTL21EPA6NDL7 271 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 TMEM14DPA8MWL7 114 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 IGHV3-7P01780 117 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 H2AFB2P0C5Z0 115 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 CHATP28329 748 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 FAUP35544 74 aaKnown RBP10.46□□□□□ -0.73
SHMT2-211ENST00000554310 LOXL3P58215 753 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 QRFPP83859 136 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 C2orf68Q2NKX9 166 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 OR10K2Q6IF99 312 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 TCTE3Q8IZS6 198 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 OR8H3Q8N146 312 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 LINC00311Q8N616 119 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 OR4K15Q8NH41 348 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 GPX8Q8TED1 209 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 SLC25A33Q9BSK2 321 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 SERTAD4Q9NUC0 356 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 MBNL3Q9NUK0 354 aaKnown RBP10.46□□□□□ -0.73
SHMT2-211ENST00000554310 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
SHMT2-211ENST00000554310 ZNF107Q9UII5 783 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-211ENST00000554310 UBE2QL1A1L167 161 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 M0QZK8 103 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 HSD17B6O14756 317 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 HBZP02008 142 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 FAM106CPP0CH98 169 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 PTHLHP12272 177 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 CD24P25063 80 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 IL3RAP26951 378 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 CCR6P51684 374 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 ACTBP60709 375 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 ARSJQ5FYB0 599 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-211ENST00000554310 THNSL2Q86YJ6 484 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 UBALD1Q8TB05 177 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 MRPL30Q8TCC3 161 aaKnown RBP10.45□□□□□ -0.74
SHMT2-211ENST00000554310 CFHR4Q92496 578 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 RBM14Q96PK6 669 aaKnown RBP10.45□□□□□ -0.74
SHMT2-211ENST00000554310 OCSTAMPQ9BR26 566 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 URM1Q9BTM9 101 aaKnown RBP10.45□□□□□ -0.74
SHMT2-211ENST00000554310 GHITMQ9H3K2 345 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 KCNIP1Q9NZI2 227 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 GNG12Q9UBI6 72 aa10.45□□□□□ -0.74
SHMT2-211ENST00000554310 TRAV6A0A075B6T7 132 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 PRAF2O60831 178 aa10.44□□□□□ -0.74
SHMT2-211ENST00000554310 PEX14O75381 377 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms