RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 C19orf84I3L1E1 186 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 M0R135 149 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SDCBPO00560 298 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 AGPAT2O15120 278 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SIGLEC5O15389 551 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 DHHO43323 396 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 PPIHO43447 177 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 XRCC2O43543 280 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 NME2P1O60361 137 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 IFNA5P01569 189 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OPN1MWP04001 364 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 TK1P04183 234 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OR5AC1P0C628 307 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OPN1MW2P0DN77 364 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OPN1MW3P0DN78 364 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 NQO2P16083 231 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 HIST1H1BP16401 226 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FUT3P21217 361 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 VDAC1P21796 283 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 CD200P41217 278 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RPS10P46783 165 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 GLIPR1P48060 266 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FUT6P51993 359 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RND2P52198 227 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 EFNA3P52797 238 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 TAS2R30P59541 319 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RPS23P62266 143 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RPL23AP62750 156 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 HLA-DRB3P79483 266 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 DLK1P80370 383 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SERF2P84101 59 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 HNF4GQ14541 408 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 UBE2V2Q15819 145 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 C3AR1Q16581 482 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 TAF9Q16594 264 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 MPV17LQ2QL34 196 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 KRTCAP3Q53RY4 240 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 MEX3BQ6ZN04 569 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF600Q6ZNG1 722 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SLC16A13Q7RTY0 426 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 DPPA2Q7Z7J5 298 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 TGIF2LYQ8IUE0 185 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FOXRED2Q8IWF2 684 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OSR2Q8N2R0 312 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 GPR137CQ8N3F9 429 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FAM24BQ8N5W8 94 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 APCDD1LQ8NCL9 501 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 Q8NFD4 153 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OR2M3Q8NG83 312 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OR5D13Q8NGL4 314 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 OR2G3Q8NGZ4 309 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FAM213BQ8TBF2 198 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 HPSE2Q8WWQ2 592 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ROBO4Q8WZ75 1007 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SGK3Q96BR1 496 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RAB39BQ96DA2 213 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 SPACA9Q96E40 222 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 BORCS8Q96FH0 119 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF799Q96GE5 643 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 RAB40CQ96S21 281 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ATP5SQ99766 215 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 PIGQQ9BRB3 760 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ELL3Q9HB65 397 aaPredicted RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 CISD1Q9NZ45 108 aaKnown RBP5.02□□□□□ -1.61
VPS33B-203ENST00000554264 AK3Q9UIJ7 227 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 PITPNC1Q9UKF7 332 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 WSB1Q9Y6I7 421 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ZFHX3Q15911 3703 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 ZGRF1Q86YA3 2104 aa5.02□□□□□ -1.61
VPS33B-203ENST00000554264 FER1L5A0AVI2 2057 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 SEC16AO15027 2179 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TRBV24-1A0A075B6N3 115 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TRBV11-1A0A0K0K1C0 115 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF816-ZNF321PA0A0X1KG74 233 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 C3orf85A0A1B0GTC6 90 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 A0A1B0GU03 582 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 OR6C6A6NF89 314 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 C9JQL5 133 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 H0Y980 276 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 RER1O15258 196 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 PHF1O43189 567 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 CYB5R3P00387 301 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 SERPINA7P05543 415 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 SRP19P09132 144 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 IL11P20809 199 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 CRYGSP22914 178 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 GABRR1P24046 479 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 DSCR4P56555 118 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 HBG1P69891 147 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 HBG2P69892 147 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 KRTAP27-1Q3LI81 207 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 OR2B11Q5JQS5 317 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 RIPPLY2Q5TAB7 128 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 MYO7BQ6PIF6 2116 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 RBMS3Q6XE24 437 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM182Q6ZP80 229 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 MRPL52Q86TS9 123 aaKnown RBP5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF429Q86V71 674 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 ZNF695Q8IW36 515 aa5.01□□□□□ -1.61
VPS33B-203ENST00000554264 TMEM156Q8N614 296 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms