RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 ZNF626Q68DY1 528 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 CENPSQ8N2Z9 138 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 OR13C8Q8NGS7 320 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 OR8U1Q8NH10 309 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 S1PR3Q99500 378 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 TMPRSS13Q9BYE2 586 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 IFI27L2Q9H2X8 130 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 C7orf69Q9H7B7 122 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 NUDT15Q9NV35 164 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 GAB2Q9UQC2 676 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 TBL2Q9Y4P3 447 aaKnown RBP11.85□□□□□ -0.51
SHMT2-210ENST00000553950 MINOS1-NBL1R4GNA1 71 aa11.85□□□□□ -0.51
SHMT2-210ENST00000553950 B3GALNT1O75752 331 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 LGALS4P56470 323 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 RND3P61587 244 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 CATR1Q13166 79 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 MIDNQ504T8 468 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 FAHD2BQ6P2I3 314 aaPredicted RBP11.84□□□□□ -0.51
SHMT2-210ENST00000553950 LYG1Q8N1E2 194 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 PNKDQ8N490 385 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 MARCH1Q8TCQ1 289 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 CHPT1Q8WUD6 406 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 FAHD2AQ96GK7 314 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 ADTRPQ96IZ2 230 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 C18orf12Q96KH6 178 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 TBX15Q96SF7 602 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 RSRP1Q9BUV0 290 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 NOTCH2Q04721 2471 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 ABCA1O95477 2261 aa11.84□□□□□ -0.51
SHMT2-210ENST00000553950 IGKV1D-13A0A0B4J2D9 117 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 ODF3BA8MYP8 253 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 OOSP1A8MZH6 123 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 SMAD7O15105 426 aaKnown RBP11.83□□□□□ -0.52
SHMT2-210ENST00000553950 ST8SIA5O15466 376 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 CD5LO43866 347 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 PRAF2O60831 178 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 PEX14O75381 377 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 RLN1P04808 185 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 ARG1P05089 322 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 IGKV1-13P0DP09 117 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 FOSL1P15407 271 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 HTR1DP28221 377 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 OXA1LQ15070 435 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 CT45A1Q5HYN5 189 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 C5orf24Q7Z6I8 188 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 BVESQ8NE79 360 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 CT45A3Q8NHU0 189 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 LEAP2Q969E1 77 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 HSD17B10Q99714 261 aaKnown RBP11.83□□□□□ -0.52
SHMT2-210ENST00000553950 AGMATQ9BSE5 352 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 SLC2A9Q9NRM0 540 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
SHMT2-210ENST00000553950 GPR132Q9UNW8 380 aa11.83□□□□□ -0.52
SHMT2-210ENST00000553950 SAA2-SAA4A0A096LPE2 208 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 LEUTXA8MZ59 168 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 RNASEK-C17orf49H0YIS7 233 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 ARPC1BO15143 372 aaKnown RBP11.82□□□□□ -0.52
SHMT2-210ENST00000553950 DHFRP00374 187 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 H2AFB2P0C5Z0 115 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 SAA2P0DJI9 122 aaPredicted RBP11.82□□□□□ -0.52
SHMT2-210ENST00000553950 ANXA3P12429 323 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 HNF1AP20823 631 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 EPHA1P21709 976 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 TAGLNQ01995 201 aaKnown RBP11.82□□□□□ -0.52
SHMT2-210ENST00000553950 ZNF66Q6ZN08 573 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 TMED4Q7Z7H5 227 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 TCTEX1D1Q8N7M0 179 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 LHX4Q969G2 390 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 RPEQ96AT9 228 aa11.82□□□□□ -0.52
SHMT2-210ENST00000553950 PARP12Q9H0J9 701 aaKnown RBP11.82□□□□□ -0.52
SHMT2-210ENST00000553950 FLNAP21333 2647 aaKnown RBP11.81□□□□□ -0.52
SHMT2-210ENST00000553950 BUB1B-PAK6H3BSN5 160 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 HSD17B6O14756 317 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 SLC31A2O15432 143 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 THBS3P49746 956 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 MECP2P51608 486 aaKnown RBP11.81□□□□□ -0.52
SHMT2-210ENST00000553950 PIGPP57054 158 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 BAMBIQ13145 260 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 CBX3Q13185 183 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 KLRD1Q13241 179 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 SCGB2A2Q13296 93 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 TMEM128Q5BJH2 165 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 CCBE1Q6UXH8 406 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-210ENST00000553950 ZNF818PQ6ZRF7 136 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 ZNF833PQ6ZTB9 187 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 KCTD9Q7L273 389 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 SGPP2Q8IWX5 399 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 CIARTQ8N365 385 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-210ENST00000553950 DRAM1Q8N682 238 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 OR4P4Q8NGL7 312 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 MRGPRFQ96AM1 343 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 MARVELD1Q9BSK0 173 aa11.81□□□□□ -0.52
SHMT2-210ENST00000553950 ALX4Q9H161 411 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms