RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DEFA3P59666 94 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ESRRGP62508 458 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 RPS24P62847 133 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 HIST1H3AP68431 136 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 H3F3AP84243 136 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 FABP9Q0Z7S8 132 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 BTN1A1Q13410 526 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZCWPW2Q504Y3 356 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 C1orf194Q5T5A4 169 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 MRPL2Q5T653 305 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 TMEM42Q69YG0 159 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 CYB5R2Q6BCY4 276 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 FAM71E1Q6IPT2 247 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 TIFABQ6ZNK6 161 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 GLT6D1Q7Z4J2 308 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 TMEM144Q7Z5S9 345 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 YIPF7Q8N8F6 280 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 CYB561D1Q8N8Q1 229 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 LINC01555Q8NAE3 123 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 LY6G5BQ8NDX9 201 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNF555Q8NEP9 628 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR2M3Q8NG83 312 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR51A2Q8NGJ7 313 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR9A2Q8NGT5 310 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR51H1Q8NH63 302 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR4A5Q8NH83 315 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR13C6PQ8NH95 151 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 JOSD2Q8TAC2 188 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 KCTD4Q8WVF5 259 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 DYDC1Q8WWB3 177 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZHX1-C8orf76Q96EF9 292 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNF799Q96GE5 643 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 FAM210BQ96KR6 192 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 OR52E6Q96RD3 313 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 TRIB3Q96RU7 358 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 NDFIP1Q9BT67 221 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 MS4A8Q9BY19 250 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 PLA2G12AQ9BZM1 189 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 FAM107BQ9H098 131 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 RPP21Q9H633 154 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNF331Q9NQX6 463 aaPredicted RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 UBQLN4Q9NRR5 601 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 INIPQ9NRY2 104 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 CISHQ9NSE2 258 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 C19orf12Q9NSK7 152 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 UQCC1Q9NVA1 299 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ARMC1Q9NVT9 282 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 TMEM38BQ9NVV0 291 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNRD1Q9P1U0 126 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 ZNF230Q9UIE0 474 aaPredicted RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 CARHSP1Q9Y2V2 147 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 TMEM14AQ9Y6G1 99 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 GPATCH8Q9UKJ3 1502 aaKnown RBP1.49□□□□□ -2.17
SRP54-204ENST00000553923 ADAMTS13Q76LX8 1427 aa1.49□□□□□ -2.17
SRP54-204ENST00000553923 DHX57Q6P158 1386 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 KIF15Q9NS87 1388 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 FAM236DA0A1B0GTK5 79 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 PQLC2LA1A4F0 135 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 A6NED7 52 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 FAM159BA6NKW6 160 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 KNCNA6PVL3 124 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 C2orf74A8MZ97 194 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 INMT-MINDY4F8WBC2 141 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 M0R381 172 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 BPY2O14599 106 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 HMGB3O15347 200 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 SOCS1O15524 211 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 RBFOX2O43251 390 aaKnown RBP eCLIP1.48□□□□□ -2.17
SRP54-204ENST00000553923 GSTZ1O43708 216 aaPredicted RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 ATG12O94817 140 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 IGKV3-11P04433 115 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 CRHP06850 196 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 GUSBP08236 651 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 OR5G3P0C626 314 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 C1GALT1C1LP0DN25 315 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 FAM236CP0DP71 79 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 KCNE1P15382 129 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 IL1RNP18510 177 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 CD34P28906 385 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 SERPINB1P30740 379 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 CA7P43166 264 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 INPP1P49441 399 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 GZMMP51124 257 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 MNAT1P51948 309 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 TCTAP57738 103 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 C1QTNF8P60827 252 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 RUNX1Q01196 453 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 TNFRSF9Q07011 255 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 LOXL1Q08397 574 aaPredicted RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 TSNQ15631 228 aaKnown RBP1.48□□□□□ -2.17
SRP54-204ENST00000553923 ALX1Q15699 326 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 LPCAT3Q6P1A2 487 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 SBSNQ6UWP8 590 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 C5orf46Q6UWT4 87 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 ALKAL1Q6UXT8 129 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 NTM-AS1Q6ZSK4 140 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 SLC36A1Q7Z2H8 476 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 ZNF550Q7Z398 422 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
SRP54-204ENST00000553923 STX19Q8N4C7 294 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms